RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 PRR13Q9NZ81 148 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 CACNG5Q9UF02 275 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 TMEM56-RWDD3S4R434 201 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 PIGBOS1A0A0B4J2F0 54 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 LINC00854A0A1B0GVQ3 168 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 CENPXA8MT69 81 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 K7EIM0 57 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 MT-CO2P00403 227 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 VAMP1P23763 118 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 MFAP4P55083 255 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 SPCS3P61009 180 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 TMEM128Q5BJH2 165 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 Q6ZRM9 215 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 LGI3Q8N145 548 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 OR2K2Q8NGT1 345 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 HEYLQ9NQ87 328 aaPredicted RBP10.16□□□□□ -0.78
CCL28-202ENST00000489442 CACFD1Q9UGQ2 172 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 UFC1Q9Y3C8 167 aa10.16□□□□□ -0.78
CCL28-202ENST00000489442 NAP1L6A6NFF2 107 aa10.15□□□□□ -0.78
CCL28-202ENST00000489442 CEBPZOSA8MTT3 80 aa10.15□□□□□ -0.78
CCL28-202ENST00000489442 NUPL2O15504 423 aaKnown RBP10.15□□□□□ -0.78
CCL28-202ENST00000489442 IGHV3-48P01763 117 aa10.15□□□□□ -0.78
CCL28-202ENST00000489442 SULT1A3P0DMM9 295 aa10.15□□□□□ -0.78
CCL28-202ENST00000489442 SULT1A4P0DMN0 295 aa10.15□□□□□ -0.78
CCL28-202ENST00000489442 CBLN1P23435 193 aa10.15□□□□□ -0.78
CCL28-202ENST00000489442 SUPT4H1P63272 117 aaKnown RBP10.15□□□□□ -0.78
CCL28-202ENST00000489442 BAK1Q16611 211 aa10.15□□□□□ -0.78
CCL28-202ENST00000489442 CD300EQ496F6 205 aaPredicted RBP10.15□□□□□ -0.78
CCL28-202ENST00000489442 TECRQ9NZ01 308 aaKnown RBP10.15□□□□□ -0.78
CCL28-202ENST00000489442 A0A0B4J2A0 478 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 IZUMO1RA6ND01 250 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 A8MWP6 167 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 INS-IGF2F8WCM5 200 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 I3L2K1 104 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 CORTO00230 105 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 GNG7O60262 68 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 CCR6P51684 374 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 RBMS2Q15434 407 aaKnown RBP10.14□□□□□ -0.79
CCL28-202ENST00000489442 GUCA2BQ16661 112 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 TM4SF20Q53R12 229 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 UNQ9165/PRO28630Q6UXU0 137 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 ADAMTSL5Q6ZMM2 481 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 CENPSQ8N2Z9 138 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 UXS1Q8NBZ7 420 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 DUSP18Q8NEJ0 188 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 CACNG8Q8WXS5 425 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 TXN2Q99757 166 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 ASCL2Q99929 193 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 CHRDL1Q9BU40 450 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 C20orf24Q9BUV8 137 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 SHPKQ9UHJ6 478 aa10.14□□□□□ -0.79
CCL28-202ENST00000489442 TMEM213A2RRL7 107 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 NDUFA4O00483 81 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 YIF1AO95070 293 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 NXPH3O95157 252 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 NHLRC4P0CG21 123 aaPredicted RBP10.13□□□□□ -0.79
CCL28-202ENST00000489442 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
CCL28-202ENST00000489442 EDN2P20800 178 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 NPBWR1P48145 328 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 ELLP55199 621 aaPredicted RBP10.13□□□□□ -0.79
CCL28-202ENST00000489442 RELQ04864 619 aaPredicted RBP10.13□□□□□ -0.79
CCL28-202ENST00000489442 MARC2Q969Z3 335 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 ZNF436Q9C0F3 470 aaPredicted RBP10.13□□□□□ -0.79
CCL28-202ENST00000489442 HIPK2Q9H2X6 1198 aa10.13□□□□□ -0.79
CCL28-202ENST00000489442 MRPL27Q9P0M9 148 aaKnown RBP10.13□□□□□ -0.79
CCL28-202ENST00000489442 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
CCL28-202ENST00000489442 CTSGP08311 255 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 IL7P13232 177 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 OPRK1P41145 380 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 HTR2BP41595 481 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 SMCO1Q147U7 214 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 AARDQ4LEZ3 155 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 OR1S1Q8NH92 325 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 TMEM190Q8WZ59 177 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 TUBA4BQ9H853 241 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 DAZ1Q9NQZ3 744 aaKnown RBP10.12□□□□□ -0.79
CCL28-202ENST00000489442 SELENOKQ9Y6D0 94 aa10.12□□□□□ -0.79
CCL28-202ENST00000489442 IGHV3OR16-8A0A075B7F1 116 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 DUXBA0A1W2PPF3 345 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 SCGB2A1O75556 95 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 FCGR2BP31994 310 aaPredicted RBP10.11□□□□□ -0.79
CCL28-202ENST00000489442 ADMP35318 185 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 CD81P60033 236 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 PPP1R1AQ13522 171 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 NMSQ5H8A3 153 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 BTNL8Q6UX41 500 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
CCL28-202ENST00000489442 Q8N1Y9 231 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 WDR89Q96FK6 387 aaPredicted RBP10.11□□□□□ -0.79
CCL28-202ENST00000489442 SDHCQ99643 169 aaPredicted RBP10.11□□□□□ -0.79
CCL28-202ENST00000489442 C7orf50Q9BRJ6 194 aaKnown RBP10.11□□□□□ -0.79
CCL28-202ENST00000489442 MLXQ9UH92 298 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 DNAH9Q9NYC9 4486 aa10.11□□□□□ -0.79
CCL28-202ENST00000489442 A0A1B0GU03 582 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms