RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 OR5AC1P0C628 307 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 ETV6P41212 452 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 ELLP55199 621 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-206ENST00000489142 ZNF114Q8NC26 417 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 OR1L6Q8NGR2 347 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 MARC2Q969Z3 335 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 ISOC1Q96CN7 298 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 RTBDNQ9BSG5 229 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-206ENST00000489142 C14orf166Q9Y224 244 aaKnown RBP10.48□□□□□ -0.73
VTI1A-206ENST00000489142 RYR3Q15413 4870 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-206ENST00000489142 DISC1C4P0D8 188 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 YIF1AO95070 293 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 AKAIN1P0CW23 69 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 UCP1P25874 307 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 RPL5P46777 297 aaKnown RBP10.47□□□□□ -0.73
VTI1A-206ENST00000489142 HOXA1P49639 335 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-206ENST00000489142 MFAP4P55083 255 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 MRPS10P82664 201 aaKnown RBP10.47□□□□□ -0.73
VTI1A-206ENST00000489142 ERHP84090 104 aaKnown RBP10.47□□□□□ -0.73
VTI1A-206ENST00000489142 SSBP1Q04837 148 aaKnown RBP10.47□□□□□ -0.73
VTI1A-206ENST00000489142 MEF2DQ14814 521 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 OR51S1Q8NGJ8 323 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 LHFPL5Q8TAF8 219 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 SLIRPQ9GZT3 109 aaKnown RBP10.47□□□□□ -0.73
VTI1A-206ENST00000489142 C5orf66Q9H5L9 145 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 PRR13Q9NZ81 148 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 CSMD3Q7Z407 3707 aa10.47□□□□□ -0.73
VTI1A-206ENST00000489142 IGHV3OR16-13A0A075B7E8 117 aa10.46□□□□□ -0.73
VTI1A-206ENST00000489142 IGHV3-74A0A0B4J1X5 117 aa10.46□□□□□ -0.73
VTI1A-206ENST00000489142 CTDSPLO15194 276 aa10.46□□□□□ -0.73
VTI1A-206ENST00000489142 NUPL2O15504 423 aaKnown RBP10.46□□□□□ -0.73
VTI1A-206ENST00000489142 Q6ZRM9 215 aa10.46□□□□□ -0.73
VTI1A-206ENST00000489142 RRNAD1Q96FB5 475 aaKnown RBP10.46□□□□□ -0.73
VTI1A-206ENST00000489142 BCL7BQ9BQE9 202 aa10.46□□□□□ -0.73
VTI1A-206ENST00000489142 PDCD10Q9BUL8 212 aa10.46□□□□□ -0.73
VTI1A-206ENST00000489142 NAA60Q9H7X0 242 aa10.46□□□□□ -0.73
VTI1A-206ENST00000489142 TRAV25A0A0B4J276 109 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 ANKRD20A5PA0PJZ0 165 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 GNG7O60262 68 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 ATG12O94817 140 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 NXPH3O95157 252 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 RNASE2P10153 161 aaKnown RBP10.45□□□□□ -0.74
VTI1A-206ENST00000489142 TNFSF8P32971 234 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 SNCAP37840 140 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 RELQ04864 619 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-206ENST00000489142 ANKRD55Q3KP44 614 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 MCFD2Q8NI22 146 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 GLYATL2Q8WU03 294 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 ATP6V0BQ99437 205 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 TMEM222Q9H0R3 208 aa10.45□□□□□ -0.74
VTI1A-206ENST00000489142 IGKV3-7A0A075B6H7 116 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 CRYM-AS1A6NIL9 109 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 C15orf62A8K5M9 175 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 TSPAN4O14817 238 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 TFPI2P48307 235 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 MLANAQ16655 118 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 SELENOHQ8IZQ5 122 aaKnown RBP10.44□□□□□ -0.74
VTI1A-206ENST00000489142 TMEM116Q8NCL8 245 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 RNF2Q99496 336 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 SPAG8Q99932 426 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-206ENST00000489142 GGTLC1Q9BX51 225 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 NXF2Q9GZY0 626 aaKnown RBP10.44□□□□□ -0.74
VTI1A-206ENST00000489142 ENY2Q9NPA8 101 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 MCUBQ9NWR8 336 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 MRPL36Q9P0J6 103 aaKnown RBP10.44□□□□□ -0.74
VTI1A-206ENST00000489142 SMPXQ9UHP9 88 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 GPR132Q9UNW8 380 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 TENM2Q9NT68 2774 aa10.44□□□□□ -0.74
VTI1A-206ENST00000489142 STARD9Q9P2P6 4700 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 LOC102724200A0A096LPH7 203 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-206ENST00000489142 IGHV7-4-1A0A0J9YVY3 117 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 FABP12A6NFH5 140 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 CCDC160A6NGH7 325 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 K7EMT4 169 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 CHEK1O14757 476 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 GSTZ1O43708 216 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-206ENST00000489142 CDS2O95674 445 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 SURF2Q15527 256 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-206ENST00000489142 ODF3L2Q3SX64 289 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 TMEM268Q5VZI3 342 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 LAMTOR1Q6IAA8 161 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 RBPMSQ93062 196 aaKnown RBP10.43□□□□□ -0.74
VTI1A-206ENST00000489142 TMEM230Q96A57 120 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 GPR146Q96CH1 333 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 TXN2Q99757 166 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 PRRT1Q99946 306 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 SOSTQ9BQB4 213 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-206ENST00000489142 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
VTI1A-206ENST00000489142 RSL24D1Q9UHA3 163 aaKnown RBP10.43□□□□□ -0.74
VTI1A-206ENST00000489142 IGHV3-66A0A0C4DH42 116 aa10.42□□□□□ -0.74
VTI1A-206ENST00000489142 APOHP02749 345 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-206ENST00000489142 FCGR2BP31994 310 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-206ENST00000489142 OPRK1P41145 380 aa10.42□□□□□ -0.74
VTI1A-206ENST00000489142 ZNF124Q15973 351 aa10.42□□□□□ -0.74
VTI1A-206ENST00000489142 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
VTI1A-206ENST00000489142 GBGT1Q8N5D6 347 aa10.42□□□□□ -0.74
VTI1A-206ENST00000489142 DUSP18Q8NEJ0 188 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms