RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TXN2Q99757 166 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 SRRQ9GZT4 340 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 TMEM56-RWDD3S4R434 201 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 A0A0G2JRQ6 117 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 NAP1L6A6NFF2 107 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 CENPXA8MT69 81 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 A8MWP6 167 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 INS-IGF2F8WCM5 200 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 K7EIM0 57 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 NUPL2O15504 423 aaKnown RBP10.84□□□□□ -0.67
BRCA1-218ENST00000489037 MT-CO2P00403 227 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 CBLN1P23435 193 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 ELLP55199 621 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-218ENST00000489037 TMEM187Q14656 261 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 OR52E5Q8NH55 327 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 LHFPL5Q8TAF8 219 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 GPR146Q96CH1 333 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 CACNG5Q9UF02 275 aa10.84□□□□□ -0.67
BRCA1-218ENST00000489037 GNG7O60262 68 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 SULT1A3P0DMM9 295 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 SULT1A4P0DMN0 295 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 NPBWR1P48145 328 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-218ENST00000489037 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 CD300EQ496F6 205 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-218ENST00000489037 TMEM128Q5BJH2 165 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 Q6ZRM9 215 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 UXS1Q8NBZ7 420 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 DUSP18Q8NEJ0 188 aa10.83□□□□□ -0.68
BRCA1-218ENST00000489037 ZNF436Q9C0F3 470 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-218ENST00000489037 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-218ENST00000489037 MRPL27Q9P0M9 148 aaKnown RBP10.83□□□□□ -0.68
BRCA1-218ENST00000489037 A0A0B4J2A0 478 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 CEBPZOSA8MTT3 80 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 I3L2K1 104 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 NDUFA4O00483 81 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 SCGB2A1O75556 95 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 VAMP1P23763 118 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 HTR2BP41595 481 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 RBMS2Q15434 407 aaKnown RBP10.82□□□□□ -0.68
BRCA1-218ENST00000489037 GUCA2BQ16661 112 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 ASCL2Q99929 193 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 C20orf24Q9BUV8 137 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 HIPK2Q9H2X6 1198 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 SHPKQ9UHJ6 478 aa10.82□□□□□ -0.68
BRCA1-218ENST00000489037 DUXBA0A1W2PPF3 345 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 TMEM213A2RRL7 107 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 IZUMO1RA6ND01 250 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 RNASE2P10153 161 aaKnown RBP10.81□□□□□ -0.68
BRCA1-218ENST00000489037 FCGR2BP31994 310 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-218ENST00000489037 CCR6P51684 374 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 SUPT4H1P63272 117 aaKnown RBP10.81□□□□□ -0.68
BRCA1-218ENST00000489037 AARDQ4LEZ3 155 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 UNQ9165/PRO28630Q6UXU0 137 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 ADAMTSL5Q6ZMM2 481 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 RBPMS2Q6ZRY4 209 aaKnown RBP10.81□□□□□ -0.68
BRCA1-218ENST00000489037 NOXA1Q86UR1 476 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 CENPSQ8N2Z9 138 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 TMEM190Q8WZ59 177 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 CHRDL1Q9BU40 450 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 TUBA4BQ9H853 241 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 PRR13Q9NZ81 148 aa10.81□□□□□ -0.68
BRCA1-218ENST00000489037 LINC00854A0A1B0GVQ3 168 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 RPS10-NUDT3A0A1W2PQS6 291 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 YIF1AO95070 293 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 CTSGP08311 255 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 FRMD6-AS1P0C7T7 363 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 OPRK1P41145 380 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 SMCO1Q147U7 214 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 BAK1Q16611 211 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 ANKRD55Q3KP44 614 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 LYZL2Q7Z4W2 148 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 Q8N1Y9 231 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 OR1S1Q8NH92 325 aa10.8□□□□□ -0.68
BRCA1-218ENST00000489037 C7orf50Q9BRJ6 194 aaKnown RBP10.8□□□□□ -0.68
BRCA1-218ENST00000489037 DAZ1Q9NQZ3 744 aaKnown RBP10.8□□□□□ -0.68
BRCA1-218ENST00000489037 TRAV25A0A0B4J276 109 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 A0A1B0GU03 582 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 K7EMT4 169 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 SFT2D2O95562 160 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 IGHV3-48P01763 117 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 C8orf88P0DMB2 117 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 IGHV4-30-4P0DP06 118 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 EDN2P20800 178 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 ADMP35318 185 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 CD81P60033 236 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
BRCA1-218ENST00000489037 LAMTOR1Q6IAA8 161 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 C11orf87Q6NUJ2 197 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 BTNL8Q6UX41 500 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 SLC16A13Q7RTY0 426 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 NEURL2Q9BR09 285 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 MLXQ9UH92 298 aa10.79□□□□□ -0.68
BRCA1-218ENST00000489037 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 ZNF785A8K8V0 405 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 A8MZ25 164 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms