RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 METTL15P1P0C7V9 234 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 CASP1P29466 404 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 ZNF80P51504 273 aaPredicted RBP1.26□□□□□ -2.21
RFC4-213ENST00000489028 RPL19P84098 196 aaKnown RBP1.26□□□□□ -2.21
RFC4-213ENST00000489028 KRR1Q13601 381 aaKnown RBP1.26□□□□□ -2.21
RFC4-213ENST00000489028 FAM27BQ5VT28 67 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 DHRS4L2Q6PKH6 230 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 Q6Q795 121 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 MIR17HGQ75NE6 70 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 TRAPPC6BQ86SZ2 158 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 BPIFA4PQ86YQ2 179 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 Q8NDZ9 215 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 DNAJC9Q8WXX5 260 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 TIMM21Q9BVV7 248 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 NYNRINQ9P2P1 1898 aaKnown RBP1.26□□□□□ -2.21
RFC4-213ENST00000489028 CACNA1GO43497 2377 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 PCF11O94913 1555 aaKnown RBP1.25□□□□□ -2.21
RFC4-213ENST00000489028 SCN9AQ15858 1988 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 EIF3AQ14152 1382 aaKnown RBP1.25□□□□□ -2.21
RFC4-213ENST00000489028 SLX4Q8IY92 1834 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 MEIKINA0A087WXM9 373 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 OR51F1A6NGY5 319 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 ZNF705FA8MVS1 300 aaPredicted RBP1.25□□□□□ -2.21
RFC4-213ENST00000489028 TCL1BO95988 128 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 TRGC1P0CF51 173 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 DEFA4P12838 97 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 G6PCP35575 357 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 YPEL3P61236 119 aaPredicted RBP1.25□□□□□ -2.21
RFC4-213ENST00000489028 HSPE1P61604 102 aaKnown RBP1.25□□□□□ -2.21
RFC4-213ENST00000489028 SUPT4H1P63272 117 aaKnown RBP1.25□□□□□ -2.21
RFC4-213ENST00000489028 SLC38A11Q08AI6 406 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 HES1Q14469 280 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 POU6F1Q14863 301 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 LYRM7Q5U5X0 104 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 GOLT1AQ6ZVE7 132 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 HIST3H2BBQ8N257 126 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 C12orf45Q8N5I9 185 aaPredicted RBP1.25□□□□□ -2.21
RFC4-213ENST00000489028 TERB2Q8NHR7 220 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 SLC25A40Q8TBP6 338 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 GPR146Q96CH1 333 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 RNF122Q9H9V4 155 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 CKLFQ9UBR5 152 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 TP73-AS1Q9UF72 201 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 CYSLTR1Q9Y271 337 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 ERGIC3Q9Y282 383 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 ADGRB3O60242 1522 aa1.25□□□□□ -2.21
RFC4-213ENST00000489028 PXDNLA1KZ92 1463 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 NEO1Q92859 1461 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 LTBP2Q14767 1821 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 ARHGAP32A7KAX9 2087 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 A0A1B0GVG6 124 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 C19orf84I3L1E1 186 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 SDCBPO00560 298 aaPredicted RBP1.24□□□□□ -2.21
RFC4-213ENST00000489028 ORC5O43913 435 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 PGLYRP1O75594 196 aaPredicted RBP1.24□□□□□ -2.21
RFC4-213ENST00000489028 CIAO1O76071 339 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 ATG12O94817 140 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 NAPSAO96009 420 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 HTR1AP08908 422 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 SMIM17P0DL12 118 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 CYBAP13498 195 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 PPP1R2P41236 205 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 SERPINB9P50453 376 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 CDC42P60953 191 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 KISS1Q15726 138 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 ARHGAP11BQ3KRB8 267 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 PPP1R2P3Q6NXS1 205 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 DPPA3Q6W0C5 159 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 AAED1Q7RTV5 226 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 DHFR2Q86XF0 187 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 STX12Q86Y82 276 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 CLVS1Q8IUQ0 354 aaPredicted RBP1.24□□□□□ -2.21
RFC4-213ENST00000489028 WFDC11Q8NEX6 87 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 OR8B3Q8NGG8 313 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 PFN4Q8NHR9 129 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 RNASE11Q8TAA1 199 aaKnown RBP1.24□□□□□ -2.21
RFC4-213ENST00000489028 PRRT1Q99946 306 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 CST9LQ9H4G1 147 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 PYCARDQ9ULZ3 195 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 ICE1Q9Y2F5 2266 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 RALGAPA2Q2PPJ7 1873 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 SCAF11Q99590 1463 aaKnown RBP1.24□□□□□ -2.21
RFC4-213ENST00000489028 KIAA2026Q5HYC2 2103 aa1.24□□□□□ -2.21
RFC4-213ENST00000489028 HECW2Q9P2P5 1572 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 TRBV19A0A075B6N1 114 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 TRAPPC13A5PLN9 417 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 F8W036 122 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 BUB1B-PAK6H3BSN5 160 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 HMGB3O15347 200 aaKnown RBP1.23□□□□□ -2.21
RFC4-213ENST00000489028 OR2J2O76002 312 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 IFNA7P01567 189 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 PMP2P02689 132 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 C1QCP02747 245 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 GPX1P07203 203 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 COX6A1P12074 109 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 AQP4P55087 323 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 VBP1P61758 197 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 TPRXLQ17RH7 258 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 TMEM155Q4W5P6 130 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms