RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 OR5T1Q8NG75 326 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 NOL4LQ96MY1 436 aaPredicted RBP12.55□□□□□ -0.4
CLDN11-208ENST00000488989 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 A0A0D9SG52 128 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 H3BUA1 57 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 CORTO00230 105 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 SOX15O60248 233 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 CST7O76096 145 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 CRYBA1P05813 215 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 NKX2-5P52952 324 aaPredicted RBP12.54□□□□□ -0.4
CLDN11-208ENST00000488989 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
CLDN11-208ENST00000488989 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 LINC00527Q9UJ94 153 aa12.54□□□□□ -0.4
CLDN11-208ENST00000488989 TRBV9A0A0B4J1U6 114 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 CYB5BO43169 146 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 IGLV1-40P01703 118 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 IFNA4P05014 189 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
CLDN11-208ENST00000488989 S100A11P31949 105 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 HBG1P69891 147 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 HBG2P69892 147 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 OR2T6Q8NHC8 308 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 PINX1Q96BK5 328 aaKnown RBP12.53□□□□□ -0.4
CLDN11-208ENST00000488989 GGACTQ9BVM4 153 aa12.53□□□□□ -0.4
CLDN11-208ENST00000488989 TMEM89A2RUT3 159 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 FNDC10F2Z333 226 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 IGHG4P01861 327 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 DEFA4P12838 97 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 GPX4P36969 197 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-208ENST00000488989 DLK1P80370 383 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 CD69Q07108 199 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 EXOSC2Q13868 293 aaKnown RBP12.52□□□□□ -0.41
CLDN11-208ENST00000488989 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-208ENST00000488989 OR8G2PQ6IF36 304 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 CACNG8Q8WXS5 425 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 FNDC4Q9H6D8 234 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-208ENST00000488989 ZC4H2Q9NQZ6 224 aa12.52□□□□□ -0.41
CLDN11-208ENST00000488989 PAIP2BQ9ULR5 123 aaKnown RBP12.52□□□□□ -0.41
CLDN11-208ENST00000488989 C2CD3Q4AC94 2353 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 I3L2K1 104 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-208ENST00000488989 VWC2Q2TAL6 325 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 TMUB2Q71RG4 321 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 TMEM217Q8N7C4 229 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 OR1S2Q8NGQ3 325 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 OR5C1Q8NGR4 320 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 THYN1Q9P016 225 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 FBXL17Q9UF56 701 aa12.51□□□□□ -0.41
CLDN11-208ENST00000488989 NIPBLQ6KC79 2804 aaeCLIP12.5□□□□□ -0.41
CLDN11-208ENST00000488989 K7EIM0 57 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 TAAR5O14804 337 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 PRH1P02810 166 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 SLC35B1P78383 322 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 LINC01006Q8NI28 216 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 WIPF2Q8TF74 440 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-208ENST00000488989 MISP3Q96FF7 219 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 ARL6Q9H0F7 186 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
CLDN11-208ENST00000488989 RPS10-NUDT3A0A1W2PQS6 291 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 PSMB11A5LHX3 300 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 BCL2L11O43521 198 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 DFFBO76075 338 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 MT-CO2P00403 227 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 PSMB8P28062 276 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 ETFRF1Q6IPR1 90 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 RNF152Q8N8N0 203 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 NECAP1Q8NC96 275 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 TAF15Q92804 592 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLDN11-208ENST00000488989 ATP5SQ99766 215 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 TMEM147Q9BVK8 224 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 WFDC1Q9HC57 220 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 CYTL1Q9NRR1 136 aa12.49□□□□□ -0.41
CLDN11-208ENST00000488989 FAM223BA6NKX1 122 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 OR2J3O76001 311 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 NDUFB8O95169 186 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 ELANEP08246 267 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 C4BPBP20851 252 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 MDKP21741 143 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-208ENST00000488989 OPRK1P41145 380 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 FOXE3Q13461 319 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 OPCMLQ14982 345 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 MLANAQ16655 118 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 SLC16A13Q7RTY0 426 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 FAM223AQ8IWN6 122 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 LILRB2Q8N423 598 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 COMMD1Q8N668 190 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 OR4F5Q8NH21 305 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 VN1R17PQ8TDU5 208 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 PARD6GQ9BYG4 376 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-208ENST00000488989 SMIM3Q9BZL3 60 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 UQCC1Q9NVA1 299 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 FBXL7Q9UJT9 491 aa12.48□□□□□ -0.41
CLDN11-208ENST00000488989 KANTRA0A1W2PQU2 76 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 FCGR2BP31994 310 aaPredicted RBP12.47□□□□□ -0.41
CLDN11-208ENST00000488989 RHOGP84095 191 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms