RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, human

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1L-208	ENST00000488864		F2Z2F3	143 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864		F6UZH7	168 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864		M0QZK8	103 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	PDE6D	O43924	150 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	YPEL3	P61236	119 aa	Predicted RBP	10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	OR52L2P	Q8NGH6	319 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	PATZ1	Q9HBE1	687 aa	Known RBP	10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	PAM16	Q9Y3D7	125 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	CCDC168	Q8NDH2	2452 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	SERF1A	O75920	110 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	FRMD6-AS1	P0C7T7	363 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	BRS3	P32247	399 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	MRPS11	P82912	194 aa	Known RBP	10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	TEX43	Q6ZNM6	134 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	ZNF645	Q8N7E2	425 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	MRGPRD	Q8TDS7	321 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	RAB1C	Q92928	201 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	TIMD4	Q96H15	378 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	C20orf144	Q9BQM9	153 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	HSPB9	Q9BQS6	159 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	KCNIP2	Q9NS61	270 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	MBNL3	Q9NUK0	354 aa	Known RBP	10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	PPP1R14D	Q9NXH3	145 aa		10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.83	□□□□□ -0.68
CHD1L-208	ENST00000488864	ARHGAP32	A7KAX9	2087 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	MDFIC2	A0A1B0GVS7	189 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	C17orf112	F2Z3M2	114 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	TNFRSF13B	O14836	293 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	GPR6	P46095	362 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	SELENOT	P62341	195 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	BATF	Q16520	125 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	OCC1	Q8TAD7	63 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	BPESC1	Q9GZL8	116 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	LPAR2	Q9HBW0	351 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	SCO2	A0A1W2PP80	73 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	TMEM30CP	A0ZSE6	113 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	C15orf62	A8K5M9	175 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	MGST3	O14880	152 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	TPPP2	P59282	170 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	OR13A1	Q8NGR1	328 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	PPP1R35	Q8TAP8	253 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	VN1R17P	Q8TDU5	208 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	RNF114	Q9Y508	228 aa		10.82	□□□□□ -0.68
CHD1L-208	ENST00000488864	SLC17A3	O00476	420 aa		10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	RBMXL2	O75526	392 aa	Known RBP	10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	COMP	P49747	757 aa	Predicted RBP	10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	GAGE1	Q13065	139 aa		10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	C21orf62-AS1	Q17RA5	79 aa		10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	HLA-DRB5	Q30154	266 aa		10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	RFESD	Q8TAC1	157 aa		10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	H1FX	Q92522	213 aa	Known RBP	10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	NOTCH2	Q04721	2471 aa		10.81	□□□□□ -0.68
CHD1L-208	ENST00000488864	NDUFB3	O43676	98 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	SSTR5	P35346	364 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	SLC35E4	Q6ICL7	350 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	OR10G8	Q8NGN5	311 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	BTF3L4	Q96K17	158 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	MRPL18	Q9H0U6	180 aa	Known RBP	10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	WDR83OS	Q9Y284	106 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	WNK2	Q9Y3S1	2297 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864		A0A1W2PPV4	95 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	RRH	O14718	337 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	RAB29	O14966	203 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	ARL14EPL	P0DKL9	152 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	CRISP2	P16562	243 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	TFPI2	P48307	235 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	PAFAH1B2	P68402	229 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	ZNF90	Q03938	601 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	H2BFWT	Q7Z2G1	175 aa		10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	QTRT1	Q9BXR0	403 aa	Known RBP	10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	YLPM1	P49750	1951 aa	Known RBP	10.8	□□□□□ -0.68
CHD1L-208	ENST00000488864	C12orf77	C9JDV5	145 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864		K7EN84	100 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	CD1B	P29016	333 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	LTC4S	Q16873	150 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	LRRC10	Q5BKY1	277 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	KAAG1	Q9UBP8	84 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	LINC00473	A8K010	186 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	ESD	P10768	282 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	MRPL52	Q86TS9	123 aa	Known RBP	10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	FAM168A	Q92567	244 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	CIB3	Q96Q77	187 aa	Predicted RBP	10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	VAMP8	Q9BV40	100 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	FAM234A	Q9H0X4	552 aa		10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.79	□□□□□ -0.68
CHD1L-208	ENST00000488864	IL6R	P08887	468 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	RPL31	P62899	125 aa	Known RBP	10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	TMEM183B	Q1AE95	376 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	DMRTA1	Q5VZB9	504 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	ZBTB34	Q8NCN2	500 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	OR1L6	Q8NGR2	347 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	GALM	Q96C23	342 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	DSCAML1	Q8TD84	2053 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	OR9G9	P0C7N8	305 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	TMEM249	Q2WGJ8	235 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	ZNF841	Q6ZN19	808 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	BAGE3	Q86Y29	109 aa		10.78	□□□□□ -0.68
CHD1L-208	ENST00000488864	BAGE2	Q86Y30	109 aa		10.78	□□□□□ -0.68

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