RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 MISP3Q96FF7 219 aa9.71□□□□□ -0.86
ATPAF2-207ENST00000488753 NXF2Q9GZY0 626 aaKnown RBP9.71□□□□□ -0.86
ATPAF2-207ENST00000488753 KLK11Q9UBX7 282 aa9.71□□□□□ -0.86
ATPAF2-207ENST00000488753 IGHV7-4-1A0A0J9YVY3 117 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 GABARAPH6UMI1 98 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 RGS5O15539 181 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 MT-CO2P00403 227 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 CD5P06127 495 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 PGAM2P15259 253 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 PIGPP57054 158 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 OR52I2Q8NH67 350 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 ZNF414Q96IQ9 312 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 ABHD1Q96SE0 405 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 MIXL1Q9H2W2 232 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 HYDINQ4G0P3 5121 aa9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 EPPK1P58107 5090 aaKnown RBP9.7□□□□□ -0.86
ATPAF2-207ENST00000488753 IGHV3OR16-8A0A075B7F1 116 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 CORTO00230 105 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 CTDSP2O14595 271 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 CHEK1O14757 476 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 CTDSPLO15194 276 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 SPRY2O43597 315 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 ZNF207O43670 478 aaKnown RBP9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 B3GALNT1O75752 331 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 YIF1AO95070 293 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 CD74P04233 296 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 CD3DP04234 171 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 CTSDP07339 412 aaPredicted RBP9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 P0C879 139 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 ATF4P18848 351 aaPredicted RBP9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 TAS2R19P59542 299 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 TNFRSF9Q07011 255 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 TMEM229BQ8NBD8 167 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 TMEM116Q8NCL8 245 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 ZFAND1Q8TCF1 268 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 GALNT14Q96FL9 552 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 TP53RKQ96S44 253 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 RNF2Q99496 336 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 RHPN1-AS1Q9BWJ2 59 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 C6orf62Q9GZU0 229 aaPredicted RBP9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 UBQLN2Q9UHD9 624 aa9.69□□□□□ -0.86
ATPAF2-207ENST00000488753 TRAV14DV4A0A0A6YYC5 116 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 C3orf85A0A1B0GTC6 90 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 H3BMQ9 156 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 GNG7O60262 68 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 PI3P19957 117 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 SNCAP37840 140 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 NPBWR1P48145 328 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 AKR1C2P52895 323 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 STPG3Q8N7X2 389 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 CCDC71LQ8N9Z2 235 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 DUSP18Q8NEJ0 188 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 TERB2Q8NHR7 220 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 SMIM4Q8WVI0 70 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 PINX1Q96BK5 328 aaKnown RBP9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 DIRAS2Q96HU8 199 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 GINS3Q9BRX5 216 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 MAP6D1Q9H9H5 199 aa9.68□□□□□ -0.86
ATPAF2-207ENST00000488753 A0A0B4J293 547 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 UCP1P25874 307 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 SUB1P53999 127 aaKnown RBP eCLIP9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 MEF2DQ14814 521 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 IZUMO4Q1ZYL8 232 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 DEFB135Q30KP9 77 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 FAM90A2PQ658T7 463 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 SLC35G3Q8N808 338 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 RNF183Q96D59 192 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 PDCD10Q9BUL8 212 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 SLIRPQ9GZT3 109 aaKnown RBP9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 COPZ2Q9P299 210 aa9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 RSL24D1Q9UHA3 163 aaKnown RBP9.67□□□□□ -0.86
ATPAF2-207ENST00000488753 ST8SIA3O43173 380 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 RAB3DO95716 219 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 IFNA17P01571 189 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 PPP5CP53041 499 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 TRIM16LQ309B1 348 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 RNASE12Q5GAN4 147 aaKnown RBP9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 STEAP1BQ6NZ63 245 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 LYG2Q86SG7 212 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 TMEM217Q8N7C4 229 aa9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 RRNAD1Q96FB5 475 aaKnown RBP9.66□□□□□ -0.86
ATPAF2-207ENST00000488753 PLECQ15149 4684 aaKnown RBP9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 BIRC6Q9NR09 4857 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 TRAV2A0A0B4J234 112 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 A0A0J9YWU9 116 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 NUPR2A6NF83 97 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 ZNF701M0R085 212 aaPredicted RBP9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 GSTZ1O43708 216 aaPredicted RBP9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 SCGB2A1O75556 95 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 IGHV3-48P01763 117 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 RNASE2P10153 161 aaKnown RBP9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 IL18Q14116 193 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 SURF2Q15527 256 aaPredicted RBP9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 SPINK9Q5DT21 86 aa9.65□□□□□ -0.86
ATPAF2-207ENST00000488753 TOMM20LQ6UXN7 152 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms