RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ZFAND6Q6FIF0 208 aa17.24■□□□□ 0.35
CUL4A-209ENST00000488558 SMIM4Q8WVI0 70 aa17.24■□□□□ 0.35
CUL4A-209ENST00000488558 ZNF414Q96IQ9 312 aa17.24■□□□□ 0.35
CUL4A-209ENST00000488558 FAM110AQ9BQ89 295 aa17.24■□□□□ 0.35
CUL4A-209ENST00000488558 CCDC59Q9P031 241 aaKnown RBP17.24■□□□□ 0.35
CUL4A-209ENST00000488558 LOC102724200A0A096LPH7 203 aaPredicted RBP17.23■□□□□ 0.35
CUL4A-209ENST00000488558 CTDSP2O14595 271 aa17.23■□□□□ 0.35
CUL4A-209ENST00000488558 CTDSPLO15194 276 aa17.23■□□□□ 0.35
CUL4A-209ENST00000488558 SURF2Q15527 256 aaPredicted RBP17.23■□□□□ 0.35
CUL4A-209ENST00000488558 SCGB2B2Q4G0G5 96 aa17.23■□□□□ 0.35
CUL4A-209ENST00000488558 SLC35G3Q8N808 338 aa17.23■□□□□ 0.35
CUL4A-209ENST00000488558 IL17DQ8TAD2 202 aa17.23■□□□□ 0.35
CUL4A-209ENST00000488558 OR10C1Q96KK4 312 aa17.23■□□□□ 0.35
CUL4A-209ENST00000488558 A0A0B4J293 547 aa17.22■□□□□ 0.35
CUL4A-209ENST00000488558 TMBIM6P55061 237 aa17.22■□□□□ 0.35
CUL4A-209ENST00000488558 IZUMO4Q1ZYL8 232 aa17.22■□□□□ 0.35
CUL4A-209ENST00000488558 TRIM16LQ309B1 348 aa17.22■□□□□ 0.35
CUL4A-209ENST00000488558 CLVS1Q8IUQ0 354 aaPredicted RBP17.22■□□□□ 0.35
CUL4A-209ENST00000488558 MARCH1Q8TCQ1 289 aa17.22■□□□□ 0.35
CUL4A-209ENST00000488558 PDCD10Q9BUL8 212 aa17.22■□□□□ 0.35
CUL4A-209ENST00000488558 NXF2Q9GZY0 626 aaKnown RBP17.22■□□□□ 0.35
CUL4A-209ENST00000488558 RYR2Q92736 4967 aa17.22■□□□□ 0.35
CUL4A-209ENST00000488558 OR4C46A6NHA9 309 aa17.21■□□□□ 0.35
CUL4A-209ENST00000488558 ST8SIA3O43173 380 aa17.21■□□□□ 0.35
CUL4A-209ENST00000488558 SNCAP37840 140 aa17.21■□□□□ 0.35
CUL4A-209ENST00000488558 PVRIGQ6DKI7 326 aa17.21■□□□□ 0.35
CUL4A-209ENST00000488558 DYNC2LI1Q8TCX1 351 aa17.21■□□□□ 0.35
CUL4A-209ENST00000488558 SMPXQ9UHP9 88 aa17.21■□□□□ 0.35
CUL4A-209ENST00000488558 SACSQ9NZJ4 4579 aa17.21■□□□□ 0.34
CUL4A-209ENST00000488558 IGHV3OR16-8A0A075B7F1 116 aa17.2■□□□□ 0.34
CUL4A-209ENST00000488558 IGHV7-4-1A0A0J9YVY3 117 aa17.2■□□□□ 0.34
CUL4A-209ENST00000488558 LCE6AA0A183 80 aa17.2■□□□□ 0.34
CUL4A-209ENST00000488558 CORTO00230 105 aa17.2■□□□□ 0.34
CUL4A-209ENST00000488558 GNG7O60262 68 aa17.2■□□□□ 0.34
CUL4A-209ENST00000488558 FAM219AQ8IW50 185 aa17.2■□□□□ 0.34
CUL4A-209ENST00000488558 PINX1Q96BK5 328 aaKnown RBP17.2■□□□□ 0.34
CUL4A-209ENST00000488558 RRNAD1Q96FB5 475 aaKnown RBP17.2■□□□□ 0.34
CUL4A-209ENST00000488558 C14orf166Q9Y224 244 aaKnown RBP17.2■□□□□ 0.34
CUL4A-209ENST00000488558 DISC1C4P0D8 188 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 IFNA17P01571 189 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 NPBWR1P48145 328 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 ODF3L2Q3SX64 289 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 SP6Q3SY56 376 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 AARDQ4LEZ3 155 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 SPINK9Q5DT21 86 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 DIRAS2Q96HU8 199 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 TMEM222Q9H0R3 208 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 TENM2Q9NT68 2774 aa17.19■□□□□ 0.34
CUL4A-209ENST00000488558 LYSTQ99698 3801 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 ZNF207O43670 478 aaKnown RBP17.18■□□□□ 0.34
CUL4A-209ENST00000488558 CDS2O95674 445 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 AKAIN1P0CW23 69 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 SUB1P53999 127 aaKnown RBP eCLIP17.18■□□□□ 0.34
CUL4A-209ENST00000488558 IL18Q14116 193 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 FAAP20Q6NZ36 180 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 TMEM116Q8NCL8 245 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 DUSP18Q8NEJ0 188 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 RHPN1-AS1Q9BWJ2 59 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 NAA60Q9H7X0 242 aa17.18■□□□□ 0.34
CUL4A-209ENST00000488558 A0A0G2JRQ6 117 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 CHEK1O14757 476 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 YIF1AO95070 293 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 RNASE2P10153 161 aaKnown RBP17.17■□□□□ 0.34
CUL4A-209ENST00000488558 HOXA1P49639 335 aaPredicted RBP17.17■□□□□ 0.34
CUL4A-209ENST00000488558 APOC4P55056 127 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 OR4C16Q8NGL9 310 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 RNASE11Q8TAA1 199 aaKnown RBP17.17■□□□□ 0.34
CUL4A-209ENST00000488558 PRRT1Q99946 306 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 OVOL2Q9BRP0 275 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 GINS3Q9BRX5 216 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 RTBDNQ9BSG5 229 aaPredicted RBP17.17■□□□□ 0.34
CUL4A-209ENST00000488558 UBQLN2Q9UHD9 624 aa17.17■□□□□ 0.34
CUL4A-209ENST00000488558 TRAV14DV4A0A0A6YYC5 116 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 GSTZ1O43708 216 aaPredicted RBP17.16■□□□□ 0.34
CUL4A-209ENST00000488558 IGHV3-48P01763 117 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 OR5AC1P0C628 307 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 BSXQ3C1V8 233 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 OR52E5Q8NH55 327 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 GLYATL2Q8WU03 294 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 RBPMSQ93062 196 aaKnown RBP17.16■□□□□ 0.34
CUL4A-209ENST00000488558 RNF2Q99496 336 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 ENY2Q9NPA8 101 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 TP53TG1Q9Y2A0 90 aa17.16■□□□□ 0.34
CUL4A-209ENST00000488558 KIR2DL5BA0A0G2JN68 375 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 KIR2DL5BA0A0G2JPC4 375 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 TEX13DA0A0J9YY54 714 aaPredicted RBP17.15■□□□□ 0.34
CUL4A-209ENST00000488558 NOL3O60936 208 aaKnown RBP17.15■□□□□ 0.34
CUL4A-209ENST00000488558 CD5P06127 495 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 BMI1P35226 326 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 ETV6P41212 452 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 RPL5P46777 297 aaKnown RBP17.15■□□□□ 0.34
CUL4A-209ENST00000488558 DHODHQ02127 395 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 ZNF600Q6ZNG1 722 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 Q6ZWC4 215 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 KIR2DL5AQ8N109 375 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 KIR2DL5BQ8NHK3 375 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 RSL24D1Q9UHA3 163 aaKnown RBP17.15■□□□□ 0.34
CUL4A-209ENST00000488558 GPR132Q9UNW8 380 aa17.15■□□□□ 0.34
CUL4A-209ENST00000488558 ANKRD20A5PA0PJZ0 165 aa17.14■□□□□ 0.33
CUL4A-209ENST00000488558 CRYM-AS1A6NIL9 109 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms