RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.5□□□□□ -1.05
UBE4B-210ENST00000488228 FAM25EA8MYX2 175 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 K7EIM0 57 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 BMPR1BO00238 502 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 CYB5BO43169 146 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 IGHV3-48P01763 117 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 HSPB1P04792 205 aaKnown RBP8.5□□□□□ -1.05
UBE4B-210ENST00000488228 OR8U8P0C7N1 319 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-210ENST00000488228 GPR183P32249 361 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 SNCAP37840 140 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 IAH1Q2TAA2 248 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-210ENST00000488228 BSXQ3C1V8 233 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 CLEC19AQ6UXS0 136 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 ZNF502Q8TBZ5 544 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 TMEM170AQ8WVE7 144 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 EEF1AKMT3Q96AZ1 226 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 GPN1Q9HCN4 374 aaPredicted RBP8.5□□□□□ -1.05
UBE4B-210ENST00000488228 ZC4H2Q9NQZ6 224 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 PEF1Q9UBV8 284 aaKnown RBP8.5□□□□□ -1.05
UBE4B-210ENST00000488228 DNAH3Q8TD57 4116 aa8.5□□□□□ -1.05
UBE4B-210ENST00000488228 I3L2K1 104 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 PRAF2O60831 178 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 SCGB1D2O95969 90 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 MT-CO2P00403 227 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 IGLL1P15814 213 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 ZBTB8BQ8NAP8 495 aaPredicted RBP8.49□□□□□ -1.05
UBE4B-210ENST00000488228 UBAC2Q8NBM4 344 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 OR4D5Q8NGN0 318 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 OR1L6Q8NGR2 347 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 SCARB1Q8WTV0 552 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 DCUN1D4Q92564 292 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 CXorf58Q96LI9 332 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 RANGRFQ9HD47 186 aaPredicted RBP8.49□□□□□ -1.05
UBE4B-210ENST00000488228 THYN1Q9P016 225 aa8.49□□□□□ -1.05
UBE4B-210ENST00000488228 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 OR2T8A6NH00 312 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 FAM90A26D6RGX4 464 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 F8W735 103 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-210ENST00000488228 H3BP45 60 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 GOSR2O14653 212 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 SSSCA1O60232 199 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 NPY1RP25929 384 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 ARL3P36405 182 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 HTR2BP41595 481 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 NKX2-1P43699 371 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-210ENST00000488228 POLR2GP62487 172 aaKnown RBP eCLIP8.48□□□□□ -1.05
UBE4B-210ENST00000488228 TATDN3Q17R31 274 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 RGS21Q2M5E4 152 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 PVRIGQ6DKI7 326 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 C1QL4Q86Z23 238 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 VN1R17PQ8TDU5 208 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 DLX4Q92988 240 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-210ENST00000488228 HIPK2Q9H2X6 1198 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 C21orf62Q9NYP8 219 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 GSKIPQ9P0R6 139 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 CACFD1Q9UGQ2 172 aa8.48□□□□□ -1.05
UBE4B-210ENST00000488228 RCL1Q9Y2P8 373 aaKnown RBP8.48□□□□□ -1.05
UBE4B-210ENST00000488228 TRBV7-1A0A0A6YYK4 115 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 C5orf51A6NDU8 294 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 SNRPGP15A8MWD9 76 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 G3V4G9 280 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 WRBO00258 174 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 SYNGR2O43760 224 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 SIX6O95475 246 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 IFNA10P01566 189 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 ZP3P21754 424 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 OPRK1P41145 380 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
UBE4B-210ENST00000488228 SYNJ2BPP57105 145 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 RPEL1Q2QD12 228 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 C2orf83Q53S99 150 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 Q56UQ5 140 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 OR4C12Q96R67 309 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 FNDC4Q9H6D8 234 aaPredicted RBP8.47□□□□□ -1.05
UBE4B-210ENST00000488228 MRPL36Q9P0J6 103 aaKnown RBP8.47□□□□□ -1.05
UBE4B-210ENST00000488228 PAIP2BQ9ULR5 123 aaKnown RBP8.47□□□□□ -1.05
UBE4B-210ENST00000488228 ALG5Q9Y673 324 aa8.47□□□□□ -1.05
UBE4B-210ENST00000488228 IGHV3-35A0A0C4DH35 117 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 C7orf66A4D0T2 115 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 C15orf62A8K5M9 175 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 SEC14L6B5MCN3 397 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 CORTO00230 105 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 OVOL1O14753 267 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 TGOLN2O43493 480 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 SSNA1O43805 119 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 MED6O75586 246 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 MBPP02686 304 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-210ENST00000488228 CLEC3BP05452 202 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 ID3Q02535 119 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 ACSM6Q6P461 480 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 GSG1LQ6UXU4 331 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 WFDC9Q8NEX5 89 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 RCC1LQ96I51 464 aaKnown RBP8.46□□□□□ -1.06
UBE4B-210ENST00000488228 CHRDL1Q9BU40 450 aa8.46□□□□□ -1.06
UBE4B-210ENST00000488228 GGCTO75223 188 aaKnown RBP8.45□□□□□ -1.06
UBE4B-210ENST00000488228 OR2C1O95371 312 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 TMEM50AO95807 157 aa8.45□□□□□ -1.06
UBE4B-210ENST00000488228 EDN2P20800 178 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms