RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 DNAH1Q9P2D7 4330 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 IGHV7-4-1A0A0J9YVY3 117 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 CHEK1O14757 476 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 ALDH3B2P48448 385 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 SP6Q3SY56 376 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 OR13C8Q8NGS7 320 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 TERB2Q8NHR7 220 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 C15orf40Q8WUR7 153 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 RHPN1-AS1Q9BWJ2 59 aa14.34□□□□□ -0.11
CD55-209ENST00000488171 MRPS26Q9BYN8 205 aaKnown RBP14.34□□□□□ -0.11
CD55-209ENST00000488171 OR4C46A6NHA9 309 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 INS-IGF2F8WCM5 200 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 ST8SIA3O43173 380 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 RAB3DO95716 219 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 AKR1C2P52895 323 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 TAS2R19P59542 299 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 SPCS2Q15005 226 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 STEAP1BQ6NZ63 245 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 TMEM116Q8NCL8 245 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 ZFAND1Q8TCF1 268 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 COPZ2Q9P299 210 aa14.33□□□□□ -0.12
CD55-209ENST00000488171 IGHV3-49A0A0A0MS15 119 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 A0A0G2JRQ6 117 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 GABARAPH6UMI1 98 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 CTDSP2O14595 271 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 GNG7O60262 68 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 YIF1AO95070 293 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 UCP1P25874 307 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 APOC4P55056 127 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 SCGB2B2Q4G0G5 96 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 PVRIGQ6DKI7 326 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 GPR141Q7Z602 305 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 SLC35G3Q8N808 338 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 MARCH1Q8TCQ1 289 aa14.32□□□□□ -0.12
CD55-209ENST00000488171 RGS5O15539 181 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 ATG12O94817 140 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 IFNA17P01571 189 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 TRIM16LQ309B1 348 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 FAAP20Q6NZ36 180 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 Q6ZWC4 215 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 WFDC3Q8IUB2 231 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 CCDC71LQ8N9Z2 235 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 TP53TG1Q9Y2A0 90 aa14.31□□□□□ -0.12
CD55-209ENST00000488171 TRAV14DV4A0A0A6YYC5 116 aa14.3□□□□□ -0.12
CD55-209ENST00000488171 SNCAP37840 140 aa14.3□□□□□ -0.12
CD55-209ENST00000488171 SSBP1Q04837 148 aaKnown RBP14.3□□□□□ -0.12
CD55-209ENST00000488171 DEFB135Q30KP9 77 aa14.3□□□□□ -0.12
CD55-209ENST00000488171 FAM90A2PQ658T7 463 aa14.3□□□□□ -0.12
CD55-209ENST00000488171 IGHV3OR16-13A0A075B7E8 117 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 IGHV3-74A0A0B4J1X5 117 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 KIR2DL5BA0A0G2JN68 375 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 KIR2DL5BA0A0G2JPC4 375 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 UBE2CO00762 179 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 SPRY2O43597 315 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 RNASE2P10153 161 aaKnown RBP14.29□□□□□ -0.12
CD55-209ENST00000488171 ETV6P41212 452 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 MRPS10P82664 201 aaKnown RBP14.29□□□□□ -0.12
CD55-209ENST00000488171 TOMM20LQ6UXN7 152 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 Q6ZRM9 215 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 KIR2DL5AQ8N109 375 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 DUSP18Q8NEJ0 188 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 KIR2DL5BQ8NHK3 375 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 SMIM4Q8WVI0 70 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 RTBDNQ9BSG5 229 aaPredicted RBP14.29□□□□□ -0.12
CD55-209ENST00000488171 HYDINQ4G0P3 5121 aa14.29□□□□□ -0.12
CD55-209ENST00000488171 B3GALNT1O75752 331 aa14.28□□□□□ -0.12
CD55-209ENST00000488171 JTBO76095 146 aa14.28□□□□□ -0.12
CD55-209ENST00000488171 RPL35AP18077 110 aaKnown RBP14.28□□□□□ -0.12
CD55-209ENST00000488171 NPBWR1P48145 328 aa14.28□□□□□ -0.12
CD55-209ENST00000488171 APRG1Q8IVJ8 170 aa14.28□□□□□ -0.12
CD55-209ENST00000488171 RRNAD1Q96FB5 475 aaKnown RBP14.28□□□□□ -0.12
CD55-209ENST00000488171 GALNT14Q96FL9 552 aa14.28□□□□□ -0.12
CD55-209ENST00000488171 PDCD10Q9BUL8 212 aa14.28□□□□□ -0.12
CD55-209ENST00000488171 ZFAND3Q9H8U3 227 aa14.28□□□□□ -0.12
CD55-209ENST00000488171 IGKV3-7A0A075B6H7 116 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 A0A0J9YWU9 116 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 CDS2O95674 445 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 TMEM50AO95807 157 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 APOHP02749 345 aaPredicted RBP14.27□□□□□ -0.12
CD55-209ENST00000488171 OR5AC1P0C628 307 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 BMI1P35226 326 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 TFPI2P48307 235 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 HOXA1P49639 335 aaPredicted RBP14.27□□□□□ -0.12
CD55-209ENST00000488171 EWSR1Q01844 656 aaKnown RBP eCLIP14.27□□□□□ -0.12
CD55-209ENST00000488171 MEF2DQ14814 521 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 ZNF124Q15973 351 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 AARDQ4LEZ3 155 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 STPG3Q8N7X2 389 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 LHFPL5Q8TAF8 219 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 GLYATL2Q8WU03 294 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 RNF183Q96D59 192 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 GINS3Q9BRX5 216 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 TMEM222Q9H0R3 208 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 FNDC4Q9H6D8 234 aaPredicted RBP14.27□□□□□ -0.12
CD55-209ENST00000488171 VSIRQ9H7M9 311 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 MAP6D1Q9H9H5 199 aa14.27□□□□□ -0.12
CD55-209ENST00000488171 MRPL36Q9P0J6 103 aaKnown RBP14.27□□□□□ -0.12
CD55-209ENST00000488171 CORTO00230 105 aa14.26□□□□□ -0.13
CD55-209ENST00000488171 SUB1P53999 127 aaKnown RBP eCLIP14.26□□□□□ -0.13
CD55-209ENST00000488171 TNFRSF9Q07011 255 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms