RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SNCAP37840 140 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 ETV6P41212 452 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 DHODHQ02127 395 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 TMEM61Q8N0U2 210 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 LHFPL5Q8TAF8 219 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 GLYATL2Q8WU03 294 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 TMEM190Q8WZ59 177 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 MARC2Q969Z3 335 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 RBM38Q9H0Z9 239 aaKnown RBP17.88■□□□□ 0.45
RNF38-208ENST00000488058 ENY2Q9NPA8 101 aa17.88■□□□□ 0.45
RNF38-208ENST00000488058 IGHV3OR16-8A0A075B7F1 116 aa17.87■□□□□ 0.45
RNF38-208ENST00000488058 I3L2K1 104 aa17.87■□□□□ 0.45
RNF38-208ENST00000488058 SCAF4O95104 1147 aaKnown RBP17.87■□□□□ 0.45
RNF38-208ENST00000488058 CDS2O95674 445 aa17.87■□□□□ 0.45
RNF38-208ENST00000488058 MFAP4P55083 255 aa17.87■□□□□ 0.45
RNF38-208ENST00000488058 ELLP55199 621 aaPredicted RBP17.87■□□□□ 0.45
RNF38-208ENST00000488058 TMEM268Q5VZI3 342 aa17.87■□□□□ 0.45
RNF38-208ENST00000488058 RBPMSQ93062 196 aaKnown RBP17.87■□□□□ 0.45
RNF38-208ENST00000488058 ATP6V0BQ99437 205 aa17.87■□□□□ 0.45
RNF38-208ENST00000488058 GAR1Q9NY12 217 aaKnown RBP17.87■□□□□ 0.45
RNF38-208ENST00000488058 MRPL27Q9P0M9 148 aaKnown RBP17.87■□□□□ 0.45
RNF38-208ENST00000488058 NDUFA4O00483 81 aa17.86■□□□□ 0.45
RNF38-208ENST00000488058 ADMP35318 185 aa17.86■□□□□ 0.45
RNF38-208ENST00000488058 FAUP35544 74 aaKnown RBP17.86■□□□□ 0.45
RNF38-208ENST00000488058 SELENOHQ8IZQ5 122 aaKnown RBP17.86■□□□□ 0.45
RNF38-208ENST00000488058 SCGB3A2Q96PL1 93 aa17.86■□□□□ 0.45
RNF38-208ENST00000488058 V9GYH0 126 aa17.86■□□□□ 0.45
RNF38-208ENST00000488058 NUPL2O15504 423 aaKnown RBP17.85■□□□□ 0.45
RNF38-208ENST00000488058 ZNF207O43670 478 aaKnown RBP17.85■□□□□ 0.45
RNF38-208ENST00000488058 AKR1C4P17516 323 aa17.85■□□□□ 0.45
RNF38-208ENST00000488058 Q6ZRM9 215 aa17.85■□□□□ 0.45
RNF38-208ENST00000488058 FAM219AQ8IW50 185 aa17.85■□□□□ 0.45
RNF38-208ENST00000488058 TOMM5Q8N4H5 51 aa17.85■□□□□ 0.45
RNF38-208ENST00000488058 WFDC10AQ9H1F0 79 aa17.85■□□□□ 0.45
RNF38-208ENST00000488058 PRR13Q9NZ81 148 aa17.85■□□□□ 0.45
RNF38-208ENST00000488058 KCNIP3Q9Y2W7 256 aa17.85■□□□□ 0.45
RNF38-208ENST00000488058 GNG7O60262 68 aa17.84■□□□□ 0.45
RNF38-208ENST00000488058 CTSGP08311 255 aa17.84■□□□□ 0.45
RNF38-208ENST00000488058 C8orf88P0DMB2 117 aa17.84■□□□□ 0.45
RNF38-208ENST00000488058 RBPMS2Q6ZRY4 209 aaKnown RBP17.84■□□□□ 0.45
RNF38-208ENST00000488058 DEFB125Q8N687 156 aa17.84■□□□□ 0.45
RNF38-208ENST00000488058 TRIM63Q969Q1 353 aa17.84■□□□□ 0.45
RNF38-208ENST00000488058 TMEM230Q96A57 120 aa17.84■□□□□ 0.45
RNF38-208ENST00000488058 DAZ1Q9NQZ3 744 aaKnown RBP17.84■□□□□ 0.45
RNF38-208ENST00000488058 CACNG5Q9UF02 275 aa17.84■□□□□ 0.45
RNF38-208ENST00000488058 YIF1AO95070 293 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 SUB1P53999 127 aaKnown RBP eCLIP17.83■□□□□ 0.44
RNF38-208ENST00000488058 AP3S2P59780 193 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 RELQ04864 619 aaPredicted RBP17.83■□□□□ 0.44
RNF38-208ENST00000488058 KLF9Q13886 244 aaPredicted RBP17.83■□□□□ 0.44
RNF38-208ENST00000488058 ZNF79Q15937 498 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 SLC16A13Q7RTY0 426 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 OR52B4Q8NGK2 314 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 GPR146Q96CH1 333 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 TXN2Q99757 166 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 TM2D3Q9BRN9 247 aa17.83■□□□□ 0.44
RNF38-208ENST00000488058 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.83■□□□□ 0.44
RNF38-208ENST00000488058 OR11H12B2RN74 326 aa17.82■□□□□ 0.44
RNF38-208ENST00000488058 RNASE2P10153 161 aaKnown RBP17.82■□□□□ 0.44
RNF38-208ENST00000488058 HAGHQ16775 308 aa17.82■□□□□ 0.44
RNF38-208ENST00000488058 SRD5A3Q9H8P0 318 aa17.82■□□□□ 0.44
RNF38-208ENST00000488058 INS-IGF2F8WCM5 200 aa17.81■□□□□ 0.44
RNF38-208ENST00000488058 ZNF701M0R085 212 aaPredicted RBP17.81■□□□□ 0.44
RNF38-208ENST00000488058 NXPH3O95157 252 aa17.81■□□□□ 0.44
RNF38-208ENST00000488058 SPCS3P61009 180 aa17.81■□□□□ 0.44
RNF38-208ENST00000488058 TMEM187Q14656 261 aa17.81■□□□□ 0.44
RNF38-208ENST00000488058 CCDC190Q86UF4 302 aa17.81■□□□□ 0.44
RNF38-208ENST00000488058 DUSP18Q8NEJ0 188 aa17.81■□□□□ 0.44
RNF38-208ENST00000488058 TRAV25A0A0B4J276 109 aa17.8■□□□□ 0.44
RNF38-208ENST00000488058 CORTO00230 105 aa17.8■□□□□ 0.44
RNF38-208ENST00000488058 FCGR2BP31994 310 aaPredicted RBP17.8■□□□□ 0.44
RNF38-208ENST00000488058 TMED4Q7Z7H5 227 aa17.8■□□□□ 0.44
RNF38-208ENST00000488058 GALNT14Q96FL9 552 aa17.8■□□□□ 0.44
RNF38-208ENST00000488058 SPATA25Q9BR10 227 aa17.8■□□□□ 0.44
RNF38-208ENST00000488058 TMEM56-RWDD3S4R434 201 aa17.8■□□□□ 0.44
RNF38-208ENST00000488058 CEBPZOSA8MTT3 80 aa17.79■□□□□ 0.44
RNF38-208ENST00000488058 NPBWR1P48145 328 aa17.79■□□□□ 0.44
RNF38-208ENST00000488058 ANKRD55Q3KP44 614 aa17.79■□□□□ 0.44
RNF38-208ENST00000488058 SPANXN2Q5MJ10 180 aa17.79■□□□□ 0.44
RNF38-208ENST00000488058 IL22RA2Q969J5 263 aa17.79■□□□□ 0.44
RNF38-208ENST00000488058 HEYLQ9NQ87 328 aaPredicted RBP17.79■□□□□ 0.44
RNF38-208ENST00000488058 C15orf62A8K5M9 175 aa17.78■□□□□ 0.44
RNF38-208ENST00000488058 K7EMT4 169 aa17.78■□□□□ 0.44
RNF38-208ENST00000488058 ANXA3P12429 323 aa17.78■□□□□ 0.44
RNF38-208ENST00000488058 OPRK1P41145 380 aa17.78■□□□□ 0.44
RNF38-208ENST00000488058 OR52E5Q8NH55 327 aa17.78■□□□□ 0.44
RNF38-208ENST00000488058 HUWE1Q7Z6Z7 4374 aaKnown RBP17.77■□□□□ 0.44
RNF38-208ENST00000488058 IGHV3-49A0A0A0MS15 119 aa17.77■□□□□ 0.44
RNF38-208ENST00000488058 SULT1A3P0DMM9 295 aa17.77■□□□□ 0.44
RNF38-208ENST00000488058 SULT1A4P0DMN0 295 aa17.77■□□□□ 0.44
RNF38-208ENST00000488058 SUPT4H1P63272 117 aaKnown RBP17.77■□□□□ 0.44
RNF38-208ENST00000488058 AARDQ4LEZ3 155 aa17.77■□□□□ 0.44
RNF38-208ENST00000488058 LAMTOR1Q6IAA8 161 aa17.77■□□□□ 0.44
RNF38-208ENST00000488058 ZNF414Q96IQ9 312 aa17.77■□□□□ 0.44
RNF38-208ENST00000488058 HTR2BP41595 481 aa17.76■□□□□ 0.43
RNF38-208ENST00000488058 INPP1P49441 399 aa17.76■□□□□ 0.43
RNF38-208ENST00000488058 LGI3Q8N145 548 aa17.76■□□□□ 0.43
RNF38-208ENST00000488058 SPAG8Q99932 426 aaPredicted RBP17.76■□□□□ 0.43
RNF38-208ENST00000488058 IGHV7-4-1A0A0J9YVY3 117 aa17.75■□□□□ 0.43
RNF38-208ENST00000488058 RBMY1BA6NDE4 496 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms