RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 TSPAN14Q8NG11 270 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 BORCS5Q969J3 196 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 SEC22AQ96IW7 307 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 TXN2Q99757 166 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 MS4A6AQ9H2W1 248 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 FKBP11Q9NYL4 201 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
SRRT-212ENST00000487311 AGRNO00468 2067 aa11.77□□□□□ -0.52
SRRT-212ENST00000487311 GPR31O00270 319 aa11.77□□□□□ -0.53
SRRT-212ENST00000487311 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.53
SRRT-212ENST00000487311 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.53
SRRT-212ENST00000487311 TMEM187Q14656 261 aa11.77□□□□□ -0.53
SRRT-212ENST00000487311 RBMY1FQ15415 496 aaKnown RBP11.77□□□□□ -0.53
SRRT-212ENST00000487311 CMTM1Q8IZ96 169 aa11.77□□□□□ -0.53
SRRT-212ENST00000487311 Q8NAQ8 132 aa11.77□□□□□ -0.53
SRRT-212ENST00000487311 PINX1Q96BK5 328 aaKnown RBP11.77□□□□□ -0.53
SRRT-212ENST00000487311 CMTM3Q96MX0 182 aa11.77□□□□□ -0.53
SRRT-212ENST00000487311 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
SRRT-212ENST00000487311 IZUMO4Q1ZYL8 232 aa11.76□□□□□ -0.53
SRRT-212ENST00000487311 ZNF114Q8NC26 417 aa11.76□□□□□ -0.53
SRRT-212ENST00000487311 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
SRRT-212ENST00000487311 OR6F1Q8NGZ6 308 aa11.76□□□□□ -0.53
SRRT-212ENST00000487311 S100A16Q96FQ6 103 aaKnown RBP11.76□□□□□ -0.53
SRRT-212ENST00000487311 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
SRRT-212ENST00000487311 A0A1B0GU03 582 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 DNASE2O00115 360 aaPredicted RBP11.75□□□□□ -0.53
SRRT-212ENST00000487311 ST8SIA3O43173 380 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 GNG7O60262 68 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 HRH1P35367 487 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 TAS2R20P59543 309 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 TSC22D3Q99576 134 aa11.75□□□□□ -0.53
SRRT-212ENST00000487311 DYNC1H1Q14204 4646 aaKnown RBP11.75□□□□□ -0.53
SRRT-212ENST00000487311 TCTAP57738 103 aa11.74□□□□□ -0.53
SRRT-212ENST00000487311 HSPE1P61604 102 aaKnown RBP11.74□□□□□ -0.53
SRRT-212ENST00000487311 RPL11P62913 178 aaKnown RBP11.74□□□□□ -0.53
SRRT-212ENST00000487311 PRCDQ00LT1 54 aa11.74□□□□□ -0.53
SRRT-212ENST00000487311 H2BFWTQ7Z2G1 175 aa11.74□□□□□ -0.53
SRRT-212ENST00000487311 DUSP18Q8NEJ0 188 aa11.74□□□□□ -0.53
SRRT-212ENST00000487311 YTHDF1Q9BYJ9 559 aaKnown RBP11.74□□□□□ -0.53
SRRT-212ENST00000487311 PUS1Q9Y606 427 aaKnown RBP eCLIP11.74□□□□□ -0.53
SRRT-212ENST00000487311 ELOA3CA0A087WX78 387 aaPredicted RBP11.73□□□□□ -0.53
SRRT-212ENST00000487311 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 TMEM50AO95807 157 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 PKHD1P08F94 4074 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 RPS19P39019 145 aaKnown RBP11.73□□□□□ -0.53
SRRT-212ENST00000487311 TAS2R46P59540 309 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 NEDD8Q15843 81 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 MLANAQ16655 118 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 TMEM69Q5SWH9 247 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 MRGPRFQ96AM1 343 aa11.73□□□□□ -0.53
SRRT-212ENST00000487311 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
SRRT-212ENST00000487311 KNCNA6PVL3 124 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 HLA-DMBP28068 263 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 PRSS3P35030 304 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 ERHP84090 104 aaKnown RBP11.72□□□□□ -0.53
SRRT-212ENST00000487311 UBE2NLQ5JXB2 153 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 ZNF600Q6ZNG1 722 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 Q6ZTC4 211 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 TRPT1Q86TN4 253 aaKnown RBP11.72□□□□□ -0.53
SRRT-212ENST00000487311 STHQ8IWL8 128 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 SAMD12Q8N8I0 201 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 GINS3Q9BRX5 216 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 FAM212BQ9NTI7 297 aaPredicted RBP11.72□□□□□ -0.53
SRRT-212ENST00000487311 X6R8D5 127 aa11.72□□□□□ -0.53
SRRT-212ENST00000487311 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 C11orf94C9JXX5 98 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 CD5P06127 495 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 EIF4EP06730 217 aaKnown RBP11.71□□□□□ -0.53
SRRT-212ENST00000487311 C4BPBP20851 252 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 PPP5CP53041 499 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 PVRIGQ6DKI7 326 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 GPX8Q8TED1 209 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 RABAC1Q9UI14 185 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 RYR1P21817 5038 aa11.71□□□□□ -0.53
SRRT-212ENST00000487311 A0A0B4J293 547 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 A0A1B0GVY2 172 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 ZNF705EA8MWA4 302 aaPredicted RBP11.7□□□□□ -0.54
SRRT-212ENST00000487311 K7EQG2 157 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 TMEM127O75204 238 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 NPBWR1P48145 328 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 TSPAN5P62079 268 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 CSNK1G2-AS1Q8NCQ2 148 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
SRRT-212ENST00000487311 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
SRRT-212ENST00000487311 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
SRRT-212ENST00000487311 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
SRRT-212ENST00000487311 P0C879 139 aa11.69□□□□□ -0.54
SRRT-212ENST00000487311 NPPCP23582 126 aa11.69□□□□□ -0.54
SRRT-212ENST00000487311 UCP3P55916 312 aa11.69□□□□□ -0.54
SRRT-212ENST00000487311 LSM3P62310 102 aaKnown RBP11.69□□□□□ -0.54
SRRT-212ENST00000487311 LPCAT3Q6P1A2 487 aa11.69□□□□□ -0.54
SRRT-212ENST00000487311 ZNF767PQ75MW2 155 aa11.69□□□□□ -0.54
SRRT-212ENST00000487311 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms