RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CD69Q07108 199 aa21.18■□□□□ 0.98
HLA-C-208ENST00000487245 OR4C13Q8NGP0 309 aa21.18■□□□□ 0.98
HLA-C-208ENST00000487245 IGKV1OR2-108A0A075B7D4 117 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 A0A087X0M5 115 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 IGHV1-69-2A0A0G2JMI3 117 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 A0A1B0GX30 115 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 OR10J4P0C629 311 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 LOXP28300 417 aaPredicted RBP21.17■□□□□ 0.98
HLA-C-208ENST00000487245 SELENOTP62341 195 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 NOL4LQ96MY1 436 aaPredicted RBP21.17■□□□□ 0.98
HLA-C-208ENST00000487245 COMMD5Q9GZQ3 224 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 NDUFA4L2Q9NRX3 87 aa21.17■□□□□ 0.98
HLA-C-208ENST00000487245 RP1L1Q8IWN7 2480 aaPredicted RBP21.17■□□□□ 0.98
HLA-C-208ENST00000487245 FAM87AP0C7U9 286 aa21.16■□□□□ 0.98
HLA-C-208ENST00000487245 OR10J1P30954 320 aa21.16■□□□□ 0.98
HLA-C-208ENST00000487245 ZNF137PP52743 207 aa21.16■□□□□ 0.98
HLA-C-208ENST00000487245 DLX6P56179 175 aa21.16■□□□□ 0.98
HLA-C-208ENST00000487245 TAS2R45P59539 299 aa21.16■□□□□ 0.98
HLA-C-208ENST00000487245 RPL8P62917 257 aaKnown RBP21.16■□□□□ 0.98
HLA-C-208ENST00000487245 ERHP84090 104 aaKnown RBP21.16■□□□□ 0.98
HLA-C-208ENST00000487245 TMEM167AQ8TBQ9 72 aa21.16■□□□□ 0.98
HLA-C-208ENST00000487245 CTSZQ9UBR2 303 aa21.16■□□□□ 0.98
HLA-C-208ENST00000487245 SPENQ96T58 3664 aaKnown RBP21.16■□□□□ 0.98
HLA-C-208ENST00000487245 A0A1W2PN81 502 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 PSG5Q15238 335 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 TMEM155Q4W5P6 130 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 OR9G1Q8NH87 305 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 ZNF503Q96F45 646 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 RNF2Q99496 336 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 MRPL32Q9BYC8 188 aaKnown RBP21.15■□□□□ 0.98
HLA-C-208ENST00000487245 ACACAQ13085 2346 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 UCNP55089 124 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 PRO1933Q9H354 126 aa21.15■□□□□ 0.98
HLA-C-208ENST00000487245 CFAP47Q6ZTR5 3102 aa21.14■□□□□ 0.98
HLA-C-208ENST00000487245 ACTL6BO94805 426 aa21.14■□□□□ 0.97
HLA-C-208ENST00000487245 LGALS4P56470 323 aa21.14■□□□□ 0.97
HLA-C-208ENST00000487245 ZNF90Q03938 601 aa21.14■□□□□ 0.97
HLA-C-208ENST00000487245 HLA-DRB5Q30154 266 aa21.14■□□□□ 0.97
HLA-C-208ENST00000487245 LINC00469Q8N7U9 141 aa21.14■□□□□ 0.97
HLA-C-208ENST00000487245 ST6GALNAC6Q969X2 333 aa21.14■□□□□ 0.97
HLA-C-208ENST00000487245 WASHC3Q9Y3C0 194 aa21.14■□□□□ 0.97
HLA-C-208ENST00000487245 MC5RP33032 325 aa21.13■□□□□ 0.97
HLA-C-208ENST00000487245 FBXL19-AS1Q494R0 122 aa21.13■□□□□ 0.97
HLA-C-208ENST00000487245 A0A1W2PRE2 83 aa21.13■□□□□ 0.97
HLA-C-208ENST00000487245 ADMP35318 185 aa21.13■□□□□ 0.97
HLA-C-208ENST00000487245 MOB3BQ86TA1 216 aa21.13■□□□□ 0.97
HLA-C-208ENST00000487245 FAM122AQ96E09 287 aa21.13■□□□□ 0.97
HLA-C-208ENST00000487245 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.12■□□□□ 0.97
HLA-C-208ENST00000487245 HELTA6NFD8 242 aa21.12■□□□□ 0.97
HLA-C-208ENST00000487245 HNF1AP20823 631 aa21.12■□□□□ 0.97
HLA-C-208ENST00000487245 V9GYV3 84 aa21.12■□□□□ 0.97
HLA-C-208ENST00000487245 TRBV9A0A0B4J1U6 114 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 PSMB11A5LHX3 300 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 FSTL3O95633 263 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 C8orf88P0DMB2 117 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 CHRNB4P30926 498 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 GNG4P50150 75 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 RPEL1Q2QD12 228 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 MRPL41Q8IXM3 137 aaKnown RBP21.11■□□□□ 0.97
HLA-C-208ENST00000487245 ZNF664Q8N3J9 261 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 APC2O95996 2303 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 IGHV1-8P0DP01 117 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 CA7P43166 264 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 REG1BP48304 166 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 IQCJQ1A5X6 159 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 TGIF2LXQ8IUE1 241 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 TNFRSF14Q92956 283 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 SLC25A33Q9BSK2 321 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 OSTCQ9NRP0 149 aa21.11■□□□□ 0.97
HLA-C-208ENST00000487245 PTPRZ1P23471 2315 aaPredicted RBP21.11■□□□□ 0.97
HLA-C-208ENST00000487245 ASPMQ8IZT6 3477 aa21.1■□□□□ 0.97
HLA-C-208ENST00000487245 ANKRD11Q6UB99 2663 aaPredicted RBP21.1■□□□□ 0.97
HLA-C-208ENST00000487245 A8MWP6 167 aa21.1■□□□□ 0.97
HLA-C-208ENST00000487245 ESDP10768 282 aa21.1■□□□□ 0.97
HLA-C-208ENST00000487245 CENPWQ5EE01 88 aa21.1■□□□□ 0.97
HLA-C-208ENST00000487245 SUB1P53999 127 aaKnown RBP eCLIP21.09■□□□□ 0.979e-7■■■□□ 17.7
HLA-C-208ENST00000487245 VMA21Q3ZAQ7 101 aa21.09■□□□□ 0.97
HLA-C-208ENST00000487245 OR10W1Q8NGF6 305 aa21.09■□□□□ 0.97
HLA-C-208ENST00000487245 TMEM133Q9H2Q1 129 aa21.09■□□□□ 0.97
HLA-C-208ENST00000487245 SLC17A3O00476 420 aa21.09■□□□□ 0.97
HLA-C-208ENST00000487245 CRYBB3P26998 211 aa21.09■□□□□ 0.97
HLA-C-208ENST00000487245 LGALS7P47929 136 aa21.09■□□□□ 0.97
HLA-C-208ENST00000487245 MMD2Q8IY49 270 aa21.09■□□□□ 0.97
HLA-C-208ENST00000487245 MGAQ8IWI9 3026 aa21.08■□□□□ 0.97
HLA-C-208ENST00000487245 COL8A2P25067 703 aa21.08■□□□□ 0.97
HLA-C-208ENST00000487245 RAB4BP61018 213 aa21.08■□□□□ 0.97
HLA-C-208ENST00000487245 TMEM256Q8N2U0 113 aa21.08■□□□□ 0.97
HLA-C-208ENST00000487245 BEND2Q8NDZ0 799 aa21.08■□□□□ 0.97
HLA-C-208ENST00000487245 RALYQ9UKM9 306 aaKnown RBP21.08■□□□□ 0.97
HLA-C-208ENST00000487245 OR7C2O60412 319 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 IGLV2-23P01705 113 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 ERVFC1-1P60608 527 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 ZNF705GA8MUZ8 300 aaPredicted RBP21.07■□□□□ 0.96
HLA-C-208ENST00000487245 GGTLC3B5MD39 225 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 GATA2P23769 480 aaPredicted RBP21.07■□□□□ 0.96
HLA-C-208ENST00000487245 RPL19P84098 196 aaKnown RBP21.07■□□□□ 0.96
HLA-C-208ENST00000487245 MLANAQ16655 118 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 TIGITQ495A1 244 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 COX19Q49B96 90 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 LBHQ53QV2 105 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms