RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 A0A1B0GX30 115 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 LINC00587B1AMM8 73 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 OR10J1P30954 320 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 ZNF137PP52743 207 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 ERHP84090 104 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 DIAPH2-AS1Q14236 149 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 TMEM155Q4W5P6 130 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 ACTL10Q5JWF8 245 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 PNKDQ8N490 385 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 UHRF2Q96PU4 802 aa14.58□□□□□ -0.08
PDLIM7-207ENST00000486828 MDFIC2A0A1B0GVS7 189 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 A0A1W2PN81 502 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 ACTL6BO94805 426 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 AREGP15514 252 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 TMEM183AQ8IXX5 376 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 CACNG8Q8WXS5 425 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 BTF3L4Q96K17 158 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 C19orf24Q9BVV8 132 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 WASHC3Q9Y3C0 194 aa14.57□□□□□ -0.08
PDLIM7-207ENST00000486828 IGHV1-69-2A0A0G2JMI3 117 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 FABP4P15090 132 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 COL8A2P25067 703 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 APOBEC3AP31941 199 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 FOXL1Q12952 345 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 MLANAQ16655 118 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 OR9G1Q8NH87 305 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 TMEM167BQ9NRX6 74 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 TECRQ9NZ01 308 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 KALRNO60229 2985 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 IGLV2-23P01705 113 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 IL3RAP26951 378 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 GPX4P36969 197 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 COA6Q5JTJ3 125 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 OCC1Q8TAD7 63 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 ZFYVE26Q68DK2 2539 aa14.56□□□□□ -0.08
PDLIM7-207ENST00000486828 B9A039 149 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 E7EUB6 86 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 IGHV2-70P01814 119 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 OR5G3P0C626 314 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 IGHV1-8P0DP01 117 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 GATA2P23769 480 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 PSG5Q15238 335 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 TGIF2LXQ8IUE1 241 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 OR1P1Q8NH06 330 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 ACY3Q96HD9 319 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 HIST1H2BLQ99880 126 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 IGSF10Q6WRI0 2623 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 TNCP24821 2201 aa14.55□□□□□ -0.08
PDLIM7-207ENST00000486828 CGB1A6NKQ9 187 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 C9JCJ5 164 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 CD3EP07766 207 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 HLA-DRB5Q30154 266 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 PQLC2Q6ZP29 291 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 LY96Q9Y6Y9 160 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 TAS2R45P59539 299 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 TEX38Q6PEX7 206 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 ZNF503Q96F45 646 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 PACRGQ96M98 296 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 ZNF430Q9H8G1 570 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 DMRT1Q9Y5R6 373 aa14.54□□□□□ -0.08
PDLIM7-207ENST00000486828 XKRY2A2RUG3 117 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 MC5RP33032 325 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 WT1-ASQ06250 92 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 C11orf42Q8N5U0 333 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 OR10G8Q8NGN5 311 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 SGMS2Q8NHU3 365 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 RNASEH2CQ8TDP1 164 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 SMG1Q96Q15 3661 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 TRBV23-1A0A0A0MS06 115 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 A0A0U1RQK1 487 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 ZNF320A2RRD8 509 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 HNF1AP20823 631 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 PDLIM4P50479 330 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 VMA21Q3ZAQ7 101 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 FAM209BQ5JX69 171 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 DNLZQ5SXM8 178 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 OR2T6Q8NHC8 308 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 TMEM37Q8WXS4 190 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 TMEM133Q9H2Q1 129 aa14.53□□□□□ -0.08
PDLIM7-207ENST00000486828 K7EN84 100 aa14.52□□□□□ -0.09
PDLIM7-207ENST00000486828 SUB1P53999 127 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDLIM7-207ENST00000486828 RPL15P61313 204 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-207ENST00000486828 C10orf55Q5SWW7 151 aa14.52□□□□□ -0.09
PDLIM7-207ENST00000486828 CDPF1Q6NVV7 123 aa14.52□□□□□ -0.09
PDLIM7-207ENST00000486828 MRPL32Q9BYC8 188 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-207ENST00000486828 PSMB11A5LHX3 300 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 OR7C2O60412 319 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 C8orf88P0DMB2 117 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 EAF1Q96JC9 268 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 RNF2Q99496 336 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 SLC25A33Q9BSK2 321 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 KMT2BQ9UMN6 2715 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 GATCO43716 136 aaKnown RBP14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 SLC25A17O43808 307 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 PLAUP00749 431 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 LGALS7P47929 136 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 LY6DQ14210 128 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 ZNF124Q15973 351 aa14.51□□□□□ -0.09
PDLIM7-207ENST00000486828 TNFRSF14Q92956 283 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms