RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 MBD6Q96DN6 1003 aa17.23■□□□□ 0.35
TRADD-202ENST00000486556 F11RQ9Y624 299 aaKnown RBP17.23■□□□□ 0.35
TRADD-202ENST00000486556 RBFOX3A6NFN3 312 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 REG1AP05451 166 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 PMS2P11Q13670 270 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 MLANAQ16655 118 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 C10orf91Q5T1B1 145 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 LCN15Q6UWW0 184 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 SSMEM1Q8WWF3 244 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 SEC11CQ9BY50 192 aa17.22■□□□□ 0.35
TRADD-202ENST00000486556 MAP1LC3B2A6NCE7 125 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 B2MP61769 119 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 MIC13Q5XKP0 118 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 MAP1LC3BQ9GZQ8 125 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 MEGF9Q9H1U4 602 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 CRYBG3Q68DQ2 2970 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 ASH1LQ9NR48 2969 aaKnown RBP17.21■□□□□ 0.35
TRADD-202ENST00000486556 TRAV40A0A0B4J280 105 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 SEC14L6B5MCN3 397 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 FBLN7Q53RD9 439 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 PRSS57Q6UWY2 283 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 OR1L6Q8NGR2 347 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 FNDC4Q9H6D8 234 aaPredicted RBP17.21■□□□□ 0.35
TRADD-202ENST00000486556 SLC45A2Q9UMX9 530 aa17.21■□□□□ 0.35
TRADD-202ENST00000486556 F8W036 122 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 YIF1AO95070 293 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 APOC3P02656 99 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 CRYGCP07315 174 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 PRR20EP86478 221 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 PRR20CP86479 221 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 PRR20DP86480 221 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 PRR20BP86481 221 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 PRR20AP86496 221 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 FAM120AOSQ5T036 256 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 SSX7Q7RTT5 188 aa17.2■□□□□ 0.34
TRADD-202ENST00000486556 IGKV1OR2-108A0A075B7D4 117 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 CDC34P49427 236 aaPredicted RBP17.19■□□□□ 0.34
TRADD-202ENST00000486556 CX3CL1P78423 397 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 FAM122CQ6P4D5 195 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 STPG3Q8N7X2 389 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 Q8N9W7 124 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 OR2T6Q8NHC8 308 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 ABHD5Q8WTS1 349 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 RAB24Q969Q5 203 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 CARHSP1Q9Y2V2 147 aaKnown RBP17.19■□□□□ 0.34
TRADD-202ENST00000486556 A0A1W2PPV4 95 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 C9JQL5 133 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 PLXNB1O43157 2135 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 CTRB1P17538 263 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 MFAP2P55001 183 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 CTRB2Q6GPI1 263 aa17.19■□□□□ 0.34
TRADD-202ENST00000486556 ABCA2Q9BZC7 2435 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 J3QLI3 93 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 SFTA3P0C7M3 94 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 TMEM249Q2WGJ8 235 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 KHDC3LQ587J8 217 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 ZNF506Q5JVG8 444 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 RUSC1-AS1Q66K80 236 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 MISP3Q96FF7 219 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 ACY3Q96HD9 319 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 SLC25A22Q9H936 323 aa17.18■□□□□ 0.34
TRADD-202ENST00000486556 LINC00869P0C866 280 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 APELAP0DMC3 54 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 ADCYAP1P18509 176 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 OR10J1P30954 320 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 ARPC1AQ92747 370 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 RARRES2Q99969 163 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 RASL11BQ9BPW5 248 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 WNT10AQ9GZT5 417 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 SLC35B3Q9H1N7 401 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 FBN2P35556 2912 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 USP9YO00507 2555 aaPredicted RBP17.17■□□□□ 0.34
TRADD-202ENST00000486556 LOC105371267A0A1B0GV96 52 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 IFNA1P01562 189 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 HLA-DRB1P01911 266 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 IGHV4-38-2P0DP08 117 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 FGF8P55075 233 aaPredicted RBP17.17■□□□□ 0.34
TRADD-202ENST00000486556 RBMS3Q6XE24 437 aaKnown RBP17.17■□□□□ 0.34
TRADD-202ENST00000486556 BRD3OSQ6XYD6 125 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 THAP8Q8NA92 274 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 C22orf15Q8WYQ4 148 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 NPIPB3Q92617 1050 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 C19orf24Q9BVV8 132 aa17.17■□□□□ 0.34
TRADD-202ENST00000486556 IGHV3OR16-10A0A075B7F0 116 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 DEFA4P12838 97 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 HAGHQ16775 308 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 GCSAMLQ5JQS6 135 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 Q5PR19 223 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 SVBPQ8N300 66 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 TMEM116Q8NCL8 245 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 SLC25A33Q9BSK2 321 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 GNG13Q9P2W3 67 aa17.16■□□□□ 0.34
TRADD-202ENST00000486556 NPIPB5A8MRT5 1133 aa17.15■□□□□ 0.34
TRADD-202ENST00000486556 HSPB1P04792 205 aaKnown RBP17.15■□□□□ 0.34
TRADD-202ENST00000486556 TAGLN2P37802 199 aaKnown RBP17.15■□□□□ 0.34
TRADD-202ENST00000486556 PPT1P50897 306 aa17.15■□□□□ 0.34
TRADD-202ENST00000486556 BPIFB3P59826 476 aa17.15■□□□□ 0.34
TRADD-202ENST00000486556 A0A0U1RQK1 487 aa17.14■□□□□ 0.34
TRADD-202ENST00000486556 RNF223E7ERA6 249 aa17.14■□□□□ 0.34
TRADD-202ENST00000486556 SELENOTP62341 195 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms