RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ARFGEF1Q9Y6D6 1849 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 TRAV9-1A0A075B6T8 112 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 IGHV2-26A0A0B4J1V2 119 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 LOC389332A0A1B0GUA5 103 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 ZNF705GA8MUZ8 300 aaPredicted RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 B4DEV8 164 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 CCDC179H3BU77 68 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 UBE2L6O14933 153 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 AGPAT2O15120 278 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 LMX1BO60663 402 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 KRASP01116 189 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 CECR9P0C854 216 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 SMIM10L2AP0DMW4 78 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 SMIM10L2BP0DMW5 78 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 VDAC2P45880 294 aaPredicted RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 P2RX1P51575 399 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 NCBP2P52298 156 aaKnown RBP eCLIP3.5□□□□□ -1.85
RTN4-213ENST00000485749 NDUFV3P56181 108 aaKnown RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 MP68P56378 58 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 TMEM258P61165 79 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 BTG2P78543 158 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 PLGLB1Q02325 96 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 ADIGQ0VDE8 80 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 Q5XG85 94 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 KDM4DQ6B0I6 523 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 C11orf87Q6NUJ2 197 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 MRPL54Q6P161 138 aaKnown RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 TMEM14EPQ6UXP3 125 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 PRR15Q8IV56 129 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 C10orf126Q8N4M7 172 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 ZNF555Q8NEP9 628 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 OR10G8Q8NGN5 311 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 OR10J6PQ8NGY7 276 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 OR4K13Q8NH42 304 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 OR9G1Q8NH87 305 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 RPS4Y2Q8TD47 263 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 RTN4IP1Q8WWV3 396 aaPredicted RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 SLC25A46Q96AG3 418 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 FXYD5Q96DB9 178 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 GNPNAT1Q96EK6 184 aaPredicted RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 PEBP4Q96S96 227 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 C19orf24Q9BVV8 132 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 WDR61Q9GZS3 305 aaKnown RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 AICDAQ9GZX7 198 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 DEFB127Q9H1M4 99 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 ASF1BQ9NVP2 202 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 NUFIP1Q9UHK0 495 aaKnown RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 MPC1Q9Y5U8 109 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 BAZ2BQ9UIF8 2168 aaKnown RBP3.5□□□□□ -1.85
RTN4-213ENST00000485749 SSC5DA1L4H1 1573 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 NRAPQ86VF7 1730 aa3.5□□□□□ -1.85
RTN4-213ENST00000485749 SCN4AP35499 1836 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 CCL15-CCL14A0A0B4J2E2 113 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 IRGMA1A4Y4 181 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 TLCD2A6NGC4 264 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 CD300LBA8K4G0 201 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 PSPHP1O15172 72 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 RER1O15258 196 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 KLF7O75840 302 aaPredicted RBP3.49□□□□□ -1.85
RTN4-213ENST00000485749 MT-ND6P03923 174 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 TRGC2P03986 189 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 SCGB1C2P0DMR2 95 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 VDAC1P21796 283 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 CRYGSP22914 178 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 FKBP2P26885 142 aaKnown RBP3.49□□□□□ -1.85
RTN4-213ENST00000485749 CD70P32970 193 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 DIO3P55073 304 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 ERVK-16P61578 105 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 HERVK_113P63121 156 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 KLRD1Q13241 179 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 KLF9Q13886 244 aaPredicted RBP3.49□□□□□ -1.85
RTN4-213ENST00000485749 ZNF146Q15072 292 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 MLF2Q15773 248 aaPredicted RBP3.49□□□□□ -1.85
RTN4-213ENST00000485749 MUC21Q5SSG8 566 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 TMEM236Q5W0B7 351 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 LCN12Q6JVE5 192 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 Q6ZS49 121 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 CLEC20AQ6ZU45 233 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 TRPT1Q86TN4 253 aaKnown RBP3.49□□□□□ -1.85
RTN4-213ENST00000485749 KCNRGQ8N5I3 272 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 OR8D4Q8NGM9 314 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 OR2T10Q8NGZ9 312 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 OR10AC1Q8NH08 325 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 SGMS2Q8NHU3 365 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 SCGB1C1Q8TD33 95 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 RAB37Q96AX2 223 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 NEURL3Q96EH8 262 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 OR2A5Q96R48 311 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 DEPPQ9NTK1 212 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 FBXL12Q9NXK8 326 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 MDFICQ9P1T7 246 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 XCL2Q9UBD3 114 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 ZNF443Q9Y2A4 671 aaPredicted RBP3.49□□□□□ -1.85
RTN4-213ENST00000485749 FOCADQ5VW36 1801 aa3.49□□□□□ -1.85
RTN4-213ENST00000485749 SMIM26A0A096LP01 95 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 IZUMO1RA6ND01 250 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 DPRXA6NFQ7 191 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 OR51F1A6NGY5 319 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms