RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 FAM106AQ4KMX7 169 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 ZNF343Q6P1L6 599 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 SPSB3Q6PJ21 355 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 Q6ZRM9 215 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 C8orf86Q6ZUL3 223 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 OR11H1Q8NG94 326 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 RNASEH2CQ8TDP1 164 aaKnown RBP6.42□□□□□ -1.38
SF3A1-208ENST00000485618 DTD1Q8TEA8 209 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 DCUN1D4Q92564 292 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 MISP3Q96FF7 219 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 OR5B12Q96R08 314 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 P2RX4Q99571 388 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 TXN2Q99757 166 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 ELOVL1Q9BW60 279 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 PRR13Q9NZ81 148 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 GSKIPQ9P0R6 139 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.41□□□□□ -1.38
SF3A1-208ENST00000485618 ANKRD34BA5PLL1 514 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 I3L521 148 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 L7N2F9 121 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 NUPL2O15504 423 aaKnown RBP6.41□□□□□ -1.38
SF3A1-208ENST00000485618 SYNGR2O43760 224 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 GGCTO75223 188 aaKnown RBP6.41□□□□□ -1.38
SF3A1-208ENST00000485618 PITX3O75364 302 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 PRH1P02810 166 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 RLN2P04090 185 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 IFNA4P05014 189 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 VAMP2P63027 116 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 RPEL1Q2QD12 228 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 SLC24A4Q8NFF2 622 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 RCC1LQ96I51 464 aaKnown RBP6.41□□□□□ -1.38
SF3A1-208ENST00000485618 RAX2Q96IS3 184 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 RAB40CQ96S21 281 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 SEC22CQ9BRL7 303 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 GNB4Q9HAV0 340 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 C21orf62Q9NYP8 219 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 TRRAPQ9Y4A5 3859 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 NOTCH3Q9UM47 2321 aa6.41□□□□□ -1.38
SF3A1-208ENST00000485618 TRAV30A0A087WSZ9 112 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 A0A0G2JRQ6 117 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 A0A1B0GW64 132 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 CGB1A6NKQ9 187 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 ADAP1O75689 374 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 NDUFB8O95169 186 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 CLEC3BP05452 202 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 FABP1P07148 127 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 SLC25A4P12235 298 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 NPY1RP25929 384 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 ARL3P36405 182 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 OPRK1P41145 380 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 INSL3P51460 131 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 RELQ04864 619 aaPredicted RBP6.4□□□□□ -1.38
SF3A1-208ENST00000485618 C2orf83Q53S99 150 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 Q56UQ5 140 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 SPINK9Q5DT21 86 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 C1QL4Q86Z23 238 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 ZBTB8BQ8NAP8 495 aaPredicted RBP6.4□□□□□ -1.38
SF3A1-208ENST00000485618 WFDC9Q8NEX5 89 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 OR52B4Q8NGK2 314 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 PINX1Q96BK5 328 aaKnown RBP6.4□□□□□ -1.38
SF3A1-208ENST00000485618 BSCL2Q96G97 398 aaPredicted RBP6.4□□□□□ -1.38
SF3A1-208ENST00000485618 C2orf50Q96LR7 162 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 RBKSQ9H477 322 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 PEMTQ9UBM1 199 aa6.4□□□□□ -1.38
SF3A1-208ENST00000485618 STRAPQ9Y3F4 350 aaKnown RBP6.4□□□□□ -1.38
SF3A1-208ENST00000485618 PRKDCP78527 4128 aaKnown RBP6.4□□□□□ -1.39
SF3A1-208ENST00000485618 OVOL1O14753 267 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 GNG7O60262 68 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 TSPAN15O95858 294 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 SCGB1D2O95969 90 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 MT-CO2P00403 227 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 PET100P0DJ07 73 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 GPX4P36969 197 aaPredicted RBP6.39□□□□□ -1.39
SF3A1-208ENST00000485618 TAS2R30P59541 319 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 ID3Q02535 119 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 ACSM6Q6P461 480 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 CLEC19AQ6UXS0 136 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 ETV3LQ6ZN32 361 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 UBAC2Q8NBM4 344 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 ZNF502Q8TBZ5 544 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 SCARB1Q8WTV0 552 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 ASB13Q8WXK3 278 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 CACNG8Q8WXS5 425 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 OR4C12Q96R67 309 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
SF3A1-208ENST00000485618 PAIP2BQ9ULR5 123 aaKnown RBP6.39□□□□□ -1.39
SF3A1-208ENST00000485618 ZNF320A2RRD8 509 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 TSC22D2O75157 780 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 NXPH3O95157 252 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 RNASE2P10153 161 aaKnown RBP6.38□□□□□ -1.39
SF3A1-208ENST00000485618 S100A7P31151 101 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 HOXD3P31249 432 aaPredicted RBP6.38□□□□□ -1.39
SF3A1-208ENST00000485618 FCGR2BP31994 310 aaPredicted RBP6.38□□□□□ -1.39
SF3A1-208ENST00000485618 BMI1P35226 326 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 FHL3Q13643 280 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 DEFB136Q30KP8 78 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 BSXQ3C1V8 233 aa6.38□□□□□ -1.39
SF3A1-208ENST00000485618 SPANXN5Q5MJ07 72 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms