RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 ADMP35318 185 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 HRH1P35367 487 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 MRPS10P82664 201 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 ODF3L2Q3SX64 289 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 Q6ZWC4 215 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 OR5B3Q8NH48 314 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 OR52I2Q8NH67 350 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 ABHD1Q96SE0 405 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 ATP6V0BQ99437 205 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TSC22D3Q99576 134 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
HLA-DQB1-208ENST00000484729 DBX1A6NMT0 343 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 GABARAPH6UMI1 98 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 CTSDP07339 412 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 S100GP29377 79 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 BMI1P35226 326 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TSPAN5P62079 268 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 SPANXN2Q5MJ10 180 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 MISP3Q96FF7 219 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
HLA-DQB1-208ENST00000484729 C15orf61A6NNL5 157 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 K7EMT4 169 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 UBE2CO00762 179 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 YIF1AO95070 293 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 PYDC2Q56P42 97 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 CADM3Q8N126 398 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 OR1P1Q8NH06 330 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 SMIM4Q8WVI0 70 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TMEM14BQ9NUH8 114 aa11.32□□□□□ -0.6
HLA-DQB1-208ENST00000484729 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 CTDSPLO15194 276 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 NUPL2O15504 423 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 RELQ04864 619 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 LPCAT3Q6P1A2 487 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 LYSMD2Q8IV50 215 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 OR4A16Q8NH70 328 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 KIR2DL5BQ8NHK3 375 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 KLK11Q9UBX7 282 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 MTFP1Q9UDX5 166 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 V9GYH0 126 aa11.31□□□□□ -0.6
HLA-DQB1-208ENST00000484729 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 CTSGP08311 255 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TFPI2P48307 235 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 RNASE10Q5GAN6 216 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 RNF183Q96D59 192 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 GALNT14Q96FL9 552 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 RNF2Q99496 336 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 RHPN1-AS1Q9BWJ2 59 aa11.3□□□□□ -0.6
HLA-DQB1-208ENST00000484729 IGKV3-7A0A075B6H7 116 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 IGHV7-4-1A0A0J9YVY3 117 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 M0QYG6 137 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 MT-CO2P00403 227 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 IGHV3-48P01763 117 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 ATF4P18848 351 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TBPP20226 339 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 MFAP4P55083 255 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TAS2R19P59542 299 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 SSBP1Q04837 148 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 MRGPRFQ96AM1 343 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 SEC22AQ96IW7 307 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 MAP6D1Q9H9H5 199 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 FAM212BQ9NTI7 297 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 PTTG2Q9NZH5 202 aa11.29□□□□□ -0.6
HLA-DQB1-208ENST00000484729 VPS13DQ5THJ4 4388 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 I3L2K1 104 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 CHEK1O14757 476 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 GSTZ1O43708 216 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 IGKV1-39P01597 117 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 IGKV1D-39P04432 117 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 PRCDQ00LT1 54 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TMEM217Q8N7C4 229 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 TMEM229BQ8NBD8 167 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 SOSTQ9BQB4 213 aa11.28□□□□□ -0.6
HLA-DQB1-208ENST00000484729 IGHV3OR16-13A0A075B7E8 117 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 IGHV3-74A0A0B4J1X5 117 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 GNG7O60262 68 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 RAB3DO95716 219 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 CD3DP04234 171 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 FCGR2BP31994 310 aaPredicted RBP11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 NANOS2P60321 138 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ZNF79Q15937 498 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ZNF124Q15973 351 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 SPINK9Q5DT21 86 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ZNF114Q8NC26 417 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 OR10C1Q96KK4 312 aa11.27□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TXN2Q99757 166 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms