RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 MZT2AQ6P582 158 aa15.95■□□□□ 0.14
USP40-215ENST00000484528 TP53RKQ96S44 253 aa15.95■□□□□ 0.14
USP40-215ENST00000484528 NXF2Q9GZY0 626 aaKnown RBP15.95■□□□□ 0.14
USP40-215ENST00000484528 EXTL2Q9UBQ6 330 aa15.95■□□□□ 0.14
USP40-215ENST00000484528 TP53TG1Q9Y2A0 90 aa15.95■□□□□ 0.14
USP40-215ENST00000484528 GNG7O60262 68 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 FCGR2BP31994 310 aaPredicted RBP15.94■□□□□ 0.14
USP40-215ENST00000484528 BMI1P35226 326 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 RND3P61587 244 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 ERHP84090 104 aaKnown RBP15.94■□□□□ 0.14
USP40-215ENST00000484528 LHFPL1Q86WI0 220 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 WFDC3Q8IUB2 231 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 STPG3Q8N7X2 389 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 OR10C1Q96KK4 312 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 TXN2Q99757 166 aa15.94■□□□□ 0.14
USP40-215ENST00000484528 SMIM18P0DKX4 95 aa15.93■□□□□ 0.14
USP40-215ENST00000484528 CTF1Q16619 201 aa15.93■□□□□ 0.14
USP40-215ENST00000484528 GBGT1Q8N5D6 347 aa15.93■□□□□ 0.14
USP40-215ENST00000484528 SLC35G3Q8N808 338 aa15.93■□□□□ 0.14
USP40-215ENST00000484528 OR4D10Q8NGI6 311 aa15.93■□□□□ 0.14
USP40-215ENST00000484528 TRAV14DV4A0A0A6YYC5 116 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 KIR2DL5BA0A0G2JN68 375 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 KIR2DL5BA0A0G2JPC4 375 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 UBE2CO00762 179 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 GABARAPO95166 117 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 TNFRSF9Q07011 255 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 SP6Q3SY56 376 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 KIR2DL5AQ8N109 375 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 ARRDC1Q8N5I2 433 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 KIR2DL5BQ8NHK3 375 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 AP3S1Q92572 193 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 RNF183Q96D59 192 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 GALNT14Q96FL9 552 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 ZNF486Q96H40 463 aaPredicted RBP15.92■□□□□ 0.14
USP40-215ENST00000484528 MAP6D1Q9H9H5 199 aa15.92■□□□□ 0.14
USP40-215ENST00000484528 A0A0B4J293 547 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 C3orf85A0A1B0GTC6 90 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 ST8SIA3O43173 380 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 IFNA17P01571 189 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 P0C879 139 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 ZNF182P17025 639 aaPredicted RBP15.91■□□□□ 0.14
USP40-215ENST00000484528 GPR107Q5VW38 600 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 TOMM20LQ6UXN7 152 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 ABHD1Q96SE0 405 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 MTFP1Q9UDX5 166 aa15.91■□□□□ 0.14
USP40-215ENST00000484528 BIRC6Q9NR09 4857 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 IGHV3-66A0A0C4DH42 116 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 SNCAP37840 140 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 TRIM16LQ309B1 348 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 SCGB2B2Q4G0G5 96 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 TCF24Q7RTU0 167 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 OR13C8Q8NGS7 320 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 LINC00476Q8WZB0 136 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 ST8SIA2Q92186 375 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 COPZ2Q9P299 210 aa15.9■□□□□ 0.14
USP40-215ENST00000484528 A0A0G2JRQ6 117 aa15.89■□□□□ 0.13
USP40-215ENST00000484528 APOHP02749 345 aaPredicted RBP15.89■□□□□ 0.13
USP40-215ENST00000484528 ETV6P41212 452 aa15.89■□□□□ 0.13
USP40-215ENST00000484528 HOXA1P49639 335 aaPredicted RBP15.89■□□□□ 0.13
USP40-215ENST00000484528 FAM90A2PQ658T7 463 aa15.89■□□□□ 0.13
USP40-215ENST00000484528 DUSP18Q8NEJ0 188 aa15.89■□□□□ 0.13
USP40-215ENST00000484528 MARCH1Q8TCQ1 289 aa15.89■□□□□ 0.13
USP40-215ENST00000484528 GINS3Q9BRX5 216 aa15.89■□□□□ 0.13
USP40-215ENST00000484528 PDCD10Q9BUL8 212 aa15.89■□□□□ 0.13
USP40-215ENST00000484528 C6orf62Q9GZU0 229 aaPredicted RBP15.89■□□□□ 0.13
USP40-215ENST00000484528 PUS1Q9Y606 427 aaKnown RBP eCLIP15.89■□□□□ 0.13
USP40-215ENST00000484528 NUPR2A6NF83 97 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 RNASE2P10153 161 aaKnown RBP15.88■□□□□ 0.13
USP40-215ENST00000484528 TBPP20226 339 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 NPBWR1P48145 328 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 FAAP20Q6NZ36 180 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 LILRB2Q8N423 598 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 CCDC71LQ8N9Z2 235 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 RNASE11Q8TAA1 199 aaKnown RBP15.88■□□□□ 0.13
USP40-215ENST00000484528 MIXL1Q9H2W2 232 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 AGRNO00468 2067 aa15.88■□□□□ 0.13
USP40-215ENST00000484528 RAB3DO95716 219 aa15.87■□□□□ 0.13
USP40-215ENST00000484528 LY6G6CO95867 125 aa15.87■□□□□ 0.13
USP40-215ENST00000484528 ZNF600Q6ZNG1 722 aa15.87■□□□□ 0.13
USP40-215ENST00000484528 TMEM229BQ8NBD8 167 aa15.87■□□□□ 0.13
USP40-215ENST00000484528 TERB2Q8NHR7 220 aa15.87■□□□□ 0.13
USP40-215ENST00000484528 ZFAND1Q8TCF1 268 aa15.87■□□□□ 0.13
USP40-215ENST00000484528 ZFAND3Q9H8U3 227 aa15.87■□□□□ 0.13
USP40-215ENST00000484528 MRPL36Q9P0J6 103 aaKnown RBP15.87■□□□□ 0.13
USP40-215ENST00000484528 A0A1B0GU03 582 aa15.86■□□□□ 0.13
USP40-215ENST00000484528 ATG12O94817 140 aa15.86■□□□□ 0.13
USP40-215ENST00000484528 CD74P04233 296 aa15.86■□□□□ 0.13
USP40-215ENST00000484528 TAS2R19P59542 299 aa15.86■□□□□ 0.13
USP40-215ENST00000484528 STEAP1BQ6NZ63 245 aa15.86■□□□□ 0.13
USP40-215ENST00000484528 RRNAD1Q96FB5 475 aaKnown RBP15.86■□□□□ 0.13
USP40-215ENST00000484528 CSTL1Q9H114 145 aa15.86■□□□□ 0.13
USP40-215ENST00000484528 ENY2Q9NPA8 101 aa15.86■□□□□ 0.13
USP40-215ENST00000484528 MPTX1A8MV57 137 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 INS-IGF2F8WCM5 200 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 RGS5O15539 181 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 DFFBO76075 338 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 TMEM50AO95807 157 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 UCP1P25874 307 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 OPRK1P41145 380 aa15.85■□□□□ 0.13
USP40-215ENST00000484528 RPL11P62913 178 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms