RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 Q6ZSV7 163 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 SSX8Q7RTT4 187 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 ATP5L2Q7Z4Y8 100 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 BAGE3Q86Y29 109 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 BAGE2Q86Y30 109 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 STXBP6Q8NFX7 210 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 OR2M7Q8NG81 312 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 OR4S2Q8NH73 311 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 CACNG8Q8WXS5 425 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 YPEL2Q96QA6 119 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 MRPL32Q9BYC8 188 aaKnown RBP3.88□□□□□ -1.79
SSBP1-211ENST00000484178 SAMD10Q9BYL1 202 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 SIRPDQ9H106 197 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 PRO1933Q9H354 126 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 SLC25A22Q9H936 323 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 TECRQ9NZ01 308 aaKnown RBP3.88□□□□□ -1.79
SSBP1-211ENST00000484178 PILRBQ9UKJ0 227 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 PRNDQ9UKY0 176 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 ZFP30Q9Y2G7 519 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 MRPS16Q9Y3D3 137 aaKnown RBP3.88□□□□□ -1.79
SSBP1-211ENST00000484178 TBL2Q9Y4P3 447 aaKnown RBP3.88□□□□□ -1.79
SSBP1-211ENST00000484178 PDE4DIPQ5VU43 2346 aa3.88□□□□□ -1.79
SSBP1-211ENST00000484178 TNRC6AQ8NDV7 1962 aaKnown RBP3.87□□□□□ -1.79
SSBP1-211ENST00000484178 MED19A0JLT2 244 aaPredicted RBP3.87□□□□□ -1.79
SSBP1-211ENST00000484178 C15orf62A8K5M9 175 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF705FA8MVS1 300 aaPredicted RBP3.87□□□□□ -1.79
SSBP1-211ENST00000484178 C12orf77C9JDV5 145 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 INS-IGF2F8WCM5 200 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 TMEM178BH3BS89 294 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF253O75346 499 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 IGKV1D-33P01593 117 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 IGKV1-33P01594 117 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 SP9P0CG40 484 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF705DP0CH99 300 aaPredicted RBP3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF705BP0CI00 300 aaPredicted RBP3.87□□□□□ -1.79
SSBP1-211ENST00000484178 CCNOP22674 350 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 GCHFRP30047 84 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 GNB1P62873 340 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 P2RY6Q15077 328 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 HLA-DRB5Q30154 266 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 PRAMEF5Q5TYX0 476 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 PRAMEF6Q5VXH4 476 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 CD164L2Q6UWJ8 174 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 IL17RELQ6ZVW7 336 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 FAM231DQ6ZW35 169 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 STHQ8IWL8 128 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 DEFB119Q8N690 84 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 FGFBP3Q8TAT2 258 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ABHD3Q8WU67 409 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ORAOV1Q8WV07 137 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 OR2V2Q96R30 315 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 TBX15Q96SF7 602 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 S1PR3Q99500 378 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 SNHG12Q9BXW3 62 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 OR2J1Q9GZK6 312 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 FGF23Q9GZV9 251 aaPredicted RBP3.87□□□□□ -1.79
SSBP1-211ENST00000484178 OR2D2Q9H210 308 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ARRDC1-AS1Q9H2J1 176 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 VSIRQ9H7M9 311 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 C1RLQ9NZP8 487 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF581Q9P0T4 197 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 OR1A1Q9P1Q5 309 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 THADAQ6YHU6 1953 aa3.87□□□□□ -1.79
SSBP1-211ENST00000484178 TNRC6BQ9UPQ9 1833 aaKnown RBP3.86□□□□□ -1.79
SSBP1-211ENST00000484178 A0A0U1RRA0 63 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 FAM231BA6NCW3 169 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 M0R296 226 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 FCN1O00602 326 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 ZG16O60844 167 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 S1PR2O95136 353 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 HBZP02008 142 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 GPX1P07203 203 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 OR4A8P0C604 315 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 OR5AL1P0C617 328 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 PATE4P0C8F1 98 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 RNF224P0DH78 156 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 RD3LP0DJH9 198 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 CA6P23280 308 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 CD82P27701 267 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 OTX2P32243 289 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 DUTP33316 252 aaKnown RBP3.86□□□□□ -1.79
SSBP1-211ENST00000484178 G6PCP35575 357 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 CHRNA7P36544 502 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
SSBP1-211ENST00000484178 REG1BP48304 166 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 GNG4P50150 75 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 SUB1P53999 127 aaKnown RBP eCLIP3.86□□□□□ -1.795e-6■□□□□ 9.5
SSBP1-211ENST00000484178 HSPE1P61604 102 aaKnown RBP3.86□□□□□ -1.79
SSBP1-211ENST00000484178 ARG2P78540 354 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF415Q09FC8 603 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF718Q3SXZ3 478 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 MORN2Q502X0 79 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 TPTE2P1Q5T6R2 138 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 ZNF705AQ6ZN79 300 aaPredicted RBP3.86□□□□□ -1.79
SSBP1-211ENST00000484178 ACP7Q6ZNF0 438 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 SSX7Q7RTT5 188 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 C5orf24Q7Z6I8 188 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 MMD2Q8IY49 270 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 TMEM178AQ8NBL3 297 aa3.86□□□□□ -1.79
SSBP1-211ENST00000484178 NECAP1Q8NC96 275 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms