RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ST6GAL2Q96JF0 529 aa4.97□□□□□ -1.61
CLK1-212ENST00000482590 OR10C1Q96KK4 312 aa4.97□□□□□ -1.61
CLK1-212ENST00000482590 OR5M11Q96RB7 305 aa4.97□□□□□ -1.61
CLK1-212ENST00000482590 YIPF3Q9GZM5 350 aa4.97□□□□□ -1.61
CLK1-212ENST00000482590 RNF167Q9H6Y7 350 aa4.97□□□□□ -1.61
CLK1-212ENST00000482590 ZNF702PQ9H963 129 aa4.97□□□□□ -1.61
CLK1-212ENST00000482590 NUFIP1Q9UHK0 495 aaKnown RBP4.97□□□□□ -1.61
CLK1-212ENST00000482590 ALG5Q9Y673 324 aa4.97□□□□□ -1.61
CLK1-212ENST00000482590 FAM240AA0A1B0GVK7 77 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 ODF3BA8MYP8 253 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 NOS1APO75052 506 aaPredicted RBP4.96□□□□□ -1.62
CLK1-212ENST00000482590 CNIH1O95406 144 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 RBP4P02753 201 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 TTRP02766 147 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 GTF2F2P13984 249 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 SULT1A1P50225 295 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 SULT1A2P50226 295 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 CRYBA4P53673 196 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 FGF8P55075 233 aaPredicted RBP4.96□□□□□ -1.62
CLK1-212ENST00000482590 EDDM3AQ14507 147 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 CCDC58Q4VC31 144 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 MUC21Q5SSG8 566 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 TRAPPC6BQ86SZ2 158 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 ZNF676Q8N7Q3 588 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 GATD1Q8NB37 220 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 OR10W1Q8NGF6 305 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 TMED6Q8WW62 240 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 ASB17Q8WXJ9 295 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 MALSU1Q96EH3 234 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 ZNF486Q96H40 463 aaPredicted RBP4.96□□□□□ -1.62
CLK1-212ENST00000482590 ZNF714Q96N38 554 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 PHB2Q99623 299 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 NRIP2Q9BQI9 281 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 AMBNQ9NP70 447 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 TVP23BQ9NYZ1 205 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 KCNIP1Q9NZI2 227 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 COMMD9Q9P000 198 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 PAIP2BQ9ULR5 123 aaKnown RBP4.96□□□□□ -1.62
CLK1-212ENST00000482590 COL7A1Q02388 2944 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 RYR3Q15413 4870 aa4.96□□□□□ -1.62
CLK1-212ENST00000482590 A0A0G2JLM5 398 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 hADV38S2A0JD32 116 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 A6NDX4 124 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 DHRS7CA6NNS2 312 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 C17orf98A8MV24 154 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 ZNF670-ZNF695F2Z2N8 137 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 K7EQD1 137 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 K7N7A8 449 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 NXPH4O95158 308 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 FAM107AO95990 144 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 CYB5AP00167 134 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 IFNA21P01568 189 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 IGLV3-1P01715 115 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 ZNF728P0DKX0 622 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 IGHV1-8P0DP01 117 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 S100A1P23297 94 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 RAB13P51153 203 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 SLC35A2P78381 396 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 CDK5Q00535 292 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 MS4A2Q01362 244 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 IZUMO4Q1ZYL8 232 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 ZNF322Q6U7Q0 402 aaPredicted RBP4.95□□□□□ -1.62
CLK1-212ENST00000482590 TMEM179BQ7Z7N9 219 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 DYNAPQ8N1N2 210 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 GAPTQ8N292 157 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 Q8N2B8 174 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 C11orf42Q8N5U0 333 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 OR4X2Q8NGF9 303 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 OR10G7Q8NGN6 311 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 DNAJC9Q8WXX5 260 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 BORCS8Q96FH0 119 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 MS4A6AQ9H2W1 248 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 HES4Q9HCC6 221 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 EXOSC4Q9NPD3 245 aaKnown RBP4.95□□□□□ -1.62
CLK1-212ENST00000482590 ENOPH1Q9UHY7 261 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 OR52A1Q9UKL2 312 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 HILPDAQ9Y5L2 63 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 R4GMQ9 66 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 V9GYS6 101 aa4.95□□□□□ -1.62
CLK1-212ENST00000482590 DNAH9Q9NYC9 4486 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 IGHV4OR15-8A0A075B7B6 117 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 IGHV3OR16-12A0A075B7B8 117 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 IGHV2-26A0A0B4J1V2 119 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 PQLC2LA1A4F0 135 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 A6NIN4 97 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 C15orf65H3BRN8 121 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 H3BSH0 61 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 RPL12P30050 165 aaKnown RBP4.94□□□□□ -1.62
CLK1-212ENST00000482590 PFN2P35080 140 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 RPL29P47914 159 aaKnown RBP4.94□□□□□ -1.62
CLK1-212ENST00000482590 DYNLT3P51808 116 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 TCL1AP56279 114 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 MEF2CQ06413 473 aaPredicted RBP4.94□□□□□ -1.62
CLK1-212ENST00000482590 GRK1Q15835 563 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 HES5Q5TA89 166 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 MINOS1Q5TGZ0 78 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 NXNL2Q5VZ03 156 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 TMEM236Q5W0B7 351 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 Q6ZN92 141 aa4.94□□□□□ -1.62
CLK1-212ENST00000482590 TMEM144Q7Z5S9 345 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms