RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 CACNG8Q8WXS5 425 aa9.84□□□□□ -0.83
IFT88-206ENST00000482172 BSCL2Q96G97 398 aaPredicted RBP9.84□□□□□ -0.83
IFT88-206ENST00000482172 WNT10AQ9GZT5 417 aa9.84□□□□□ -0.83
IFT88-206ENST00000482172 CYTL1Q9NRR1 136 aa9.84□□□□□ -0.83
IFT88-206ENST00000482172 PLXNB1O43157 2135 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 BORCS7-ASMTA0A0B4J1R7 106 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 JTBO76095 146 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 BRI3O95415 125 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 REG1AP05451 166 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 APELAP0DMC3 54 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 DEFA4P12838 97 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 HIST1H1BP16401 226 aaKnown RBP9.83□□□□□ -0.84
IFT88-206ENST00000482172 EIF5AP63241 154 aaKnown RBP9.83□□□□□ -0.84
IFT88-206ENST00000482172 CD69Q07108 199 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 EXOSC2Q13868 293 aaKnown RBP9.83□□□□□ -0.84
IFT88-206ENST00000482172 ETFRF1Q6IPR1 90 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 UBAC2Q8NBM4 344 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 ATP5SQ99766 215 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 TMEM147Q9BVK8 224 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 GON7Q9BXV9 100 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
IFT88-206ENST00000482172 WFDC1Q9HC57 220 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 ESM1Q9NQ30 184 aa9.83□□□□□ -0.84
IFT88-206ENST00000482172 HIVEP2P31629 2446 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 IGLV11-55A0A075B6I3 123 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 RPS10-NUDT3A0A1W2PQS6 291 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 H3BUA1 57 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 MFAP2P55001 183 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 CLINT1Q14677 625 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 ECSCRQ19T08 205 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 SLC25A24Q6NUK1 477 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 Q6ZS46 218 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 LILRB2Q8N423 598 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 STOML3Q8TAV4 291 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 SMIM3Q9BZL3 60 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 ZNF702PQ9H963 129 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 THYN1Q9P016 225 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 DMRT1Q9Y5R6 373 aa9.82□□□□□ -0.84
IFT88-206ENST00000482172 G3V318 75 aa9.81□□□□□ -0.84
IFT88-206ENST00000482172 IFNA5P01569 189 aa9.81□□□□□ -0.84
IFT88-206ENST00000482172 PPIFP30405 207 aaKnown RBP9.81□□□□□ -0.84
IFT88-206ENST00000482172 UBA52P62987 128 aaKnown RBP9.81□□□□□ -0.84
IFT88-206ENST00000482172 OR5T1Q8NG75 326 aa9.81□□□□□ -0.84
IFT88-206ENST00000482172 FANCD2OSQ96PS1 177 aa9.81□□□□□ -0.84
IFT88-206ENST00000482172 DUX5Q96PT3 197 aa9.81□□□□□ -0.84
IFT88-206ENST00000482172 ZNF471Q9BX82 626 aaPredicted RBP9.81□□□□□ -0.84
IFT88-206ENST00000482172 ARV1Q9H2C2 271 aa9.81□□□□□ -0.84
IFT88-206ENST00000482172 UQCC1Q9NVA1 299 aa9.81□□□□□ -0.84
IFT88-206ENST00000482172 TLN2Q9Y4G6 2542 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 TRBV9A0A0B4J1U6 114 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 TMEM89A2RUT3 159 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 FAM181BA6NEQ2 426 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 I3L2K1 104 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 TPT1P13693 172 aaKnown RBP9.8□□□□□ -0.84
IFT88-206ENST00000482172 MDKP21741 143 aaPredicted RBP9.8□□□□□ -0.84
IFT88-206ENST00000482172 OPRK1P41145 380 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 CFHR3Q02985 330 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 ARSJQ5FYB0 599 aaPredicted RBP9.8□□□□□ -0.84
IFT88-206ENST00000482172 RPL7L1Q6DKI1 246 aaKnown RBP9.8□□□□□ -0.84
IFT88-206ENST00000482172 SLC16A13Q7RTY0 426 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 MISP3Q96FF7 219 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 FNDC4Q9H6D8 234 aaPredicted RBP9.8□□□□□ -0.84
IFT88-206ENST00000482172 NPVFQ9HCQ7 196 aa9.8□□□□□ -0.84
IFT88-206ENST00000482172 TCF21O43680 179 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 MPDU1O75352 247 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 CRYBA1P05813 215 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 GAMTQ14353 236 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 BAP18Q8IXM2 172 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 ST8SIA2Q92186 375 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 SLC35E1Q96K37 410 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 GINS3Q9BRX5 216 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 WDR61Q9GZS3 305 aaKnown RBP9.79□□□□□ -0.84
IFT88-206ENST00000482172 SLA2Q9H6Q3 261 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 WDR83OSQ9Y284 106 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 CELSR1Q9NYQ6 3014 aa9.79□□□□□ -0.84
IFT88-206ENST00000482172 FAM223BA6NKX1 122 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 K7EIM0 57 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 SOX15O60248 233 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 MT-CO2P00403 227 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 IGLV1-40P01703 118 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 TREML4Q6UXN2 200 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 C19orf35Q6ZS72 473 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 Q6ZSV7 163 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 FAM223AQ8IWN6 122 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 NECAP1Q8NC96 275 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 TMEM116Q8NCL8 245 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 OR2T6Q8NHC8 308 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 VN1R17PQ8TDU5 208 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 GNPNAT1Q96EK6 184 aaPredicted RBP9.78□□□□□ -0.84
IFT88-206ENST00000482172 PHYHIPLQ96FC7 376 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 NOL4LQ96MY1 436 aaPredicted RBP9.78□□□□□ -0.84
IFT88-206ENST00000482172 C16orf95Q9H693 158 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 SERTAD4Q9NUC0 356 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 LINC00527Q9UJ94 153 aa9.78□□□□□ -0.84
IFT88-206ENST00000482172 LSM4Q9Y4Z0 139 aaKnown RBP9.78□□□□□ -0.84
IFT88-206ENST00000482172 SONP18583 2426 aaKnown RBP9.78□□□□□ -0.84
IFT88-206ENST00000482172 SVEP1Q4LDE5 3571 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms