RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 EIF5AL1Q6IS14 154 aaKnown RBP8.01□□□□□ -1.13
USP39-215ENST00000481409 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 LILRB2Q8N423 598 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 COMMD1Q8N668 190 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 UBAC2Q8NBM4 344 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 OR5C1Q8NGR4 320 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 STOML3Q8TAV4 291 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 RBMXL1Q96E39 390 aaKnown RBP8.01□□□□□ -1.13
USP39-215ENST00000481409 TMEM147Q9BVK8 224 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 SLA2Q9H6Q3 261 aa8.01□□□□□ -1.13
USP39-215ENST00000481409 GAR1Q9NY12 217 aaKnown RBP8.01□□□□□ -1.13
USP39-215ENST00000481409 TCF21O43680 179 aa8□□□□□ -1.13
USP39-215ENST00000481409 SCGB2A1O75556 95 aa8□□□□□ -1.13
USP39-215ENST00000481409 CST7O76096 145 aa8□□□□□ -1.13
USP39-215ENST00000481409 TPT1P13693 172 aaKnown RBP8□□□□□ -1.13
USP39-215ENST00000481409 NKX2-5P52952 324 aaPredicted RBP8□□□□□ -1.13
USP39-215ENST00000481409 BLCAPP62952 87 aa8□□□□□ -1.13
USP39-215ENST00000481409 UBA52P62987 128 aaKnown RBP8□□□□□ -1.13
USP39-215ENST00000481409 SLC35B1P78383 322 aa8□□□□□ -1.13
USP39-215ENST00000481409 CD69Q07108 199 aa8□□□□□ -1.13
USP39-215ENST00000481409 ASPHD1Q5U4P2 390 aa8□□□□□ -1.13
USP39-215ENST00000481409 LFNGQ8NES3 379 aa8□□□□□ -1.13
USP39-215ENST00000481409 PHYHIPLQ96FC7 376 aa8□□□□□ -1.13
USP39-215ENST00000481409 CXorf58Q96LI9 332 aa8□□□□□ -1.13
USP39-215ENST00000481409 WNT10AQ9GZT5 417 aa8□□□□□ -1.13
USP39-215ENST00000481409 NPVFQ9HCQ7 196 aa8□□□□□ -1.13
USP39-215ENST00000481409 UQCC1Q9NVA1 299 aa8□□□□□ -1.13
USP39-215ENST00000481409 FBXL17Q9UF56 701 aa8□□□□□ -1.13
USP39-215ENST00000481409 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
USP39-215ENST00000481409 IGLV11-55A0A075B6I3 123 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 TRBV9A0A0B4J1U6 114 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 FAM223BA6NKX1 122 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 FCGR2BP31994 310 aaPredicted RBP7.99□□□□□ -1.13
USP39-215ENST00000481409 RAB31Q13636 194 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 ARSJQ5FYB0 599 aaPredicted RBP7.99□□□□□ -1.13
USP39-215ENST00000481409 C9orf152Q5JTZ5 239 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 OR8G2PQ6IF36 304 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 SLC25A24Q6NUK1 477 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 TMEM144Q7Z5S9 345 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 FAM223AQ8IWN6 122 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 TMEM217Q8N7C4 229 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 NECAP1Q8NC96 275 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 TMEM116Q8NCL8 245 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 OR2T6Q8NHC8 308 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 VN1R17PQ8TDU5 208 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 TMEM170AQ8WVE7 144 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 GNPNAT1Q96EK6 184 aaPredicted RBP7.99□□□□□ -1.13
USP39-215ENST00000481409 USMG5Q96IX5 58 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 SLC35E1Q96K37 410 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 TXN2Q99757 166 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 FAM103A1Q9BTL3 118 aaKnown RBP7.99□□□□□ -1.13
USP39-215ENST00000481409 GSX1Q9H4S2 264 aaPredicted RBP7.99□□□□□ -1.13
USP39-215ENST00000481409 C16orf95Q9H693 158 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 ZNF702PQ9H963 129 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 KCNIP2Q9NS61 270 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 FBXO7Q9Y3I1 522 aa7.99□□□□□ -1.13
USP39-215ENST00000481409 ACANP16112 2415 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 TRAV30A0A087WSZ9 112 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 C17orf112F2Z3M2 114 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 PLXNB1O43157 2135 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 NDUFA7O95182 113 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 PPIFP30405 207 aaKnown RBP7.98□□□□□ -1.13
USP39-215ENST00000481409 OPRK1P41145 380 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 ECSCRQ19T08 205 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 HAPLN4Q86UW8 402 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 BAP18Q8IXM2 172 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 SCGB1C1Q8TD33 95 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 ZNF471Q9BX82 626 aaPredicted RBP7.98□□□□□ -1.13
USP39-215ENST00000481409 ARV1Q9H2C2 271 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 TIMM9Q9Y5J7 89 aa7.98□□□□□ -1.13
USP39-215ENST00000481409 TRBV7-1A0A0A6YYK4 115 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 A0A0G2JLM5 398 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 A0A1B0GUS0 222 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 FAM181BA6NEQ2 426 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 I3L2K1 104 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 IGLV1-40P01703 118 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 IGHG4P01861 327 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 REG1AP05451 166 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 FABP1P07148 127 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 ELANEP08246 267 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 SEC11BP0C7V7 166 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 MDKP21741 143 aaPredicted RBP7.97□□□□□ -1.13
USP39-215ENST00000481409 NPBWR1P48145 328 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 SERF2P84101 59 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 CFHR3Q02985 330 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 ARL16Q0P5N6 197 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 CLINT1Q14677 625 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 TEPPQ6URK8 271 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 SLC16A13Q7RTY0 426 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 CENPVQ7Z7K6 275 aaPredicted RBP7.97□□□□□ -1.13
USP39-215ENST00000481409 OR4X1Q8NH49 305 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 WFDC12Q8WWY7 111 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 MISP3Q96FF7 219 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 FANCD2OSQ96PS1 177 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 GINS3Q9BRX5 216 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 PSMG3Q9BT73 122 aaPredicted RBP7.97□□□□□ -1.13
USP39-215ENST00000481409 WDR61Q9GZS3 305 aaKnown RBP7.97□□□□□ -1.13
USP39-215ENST00000481409 ESM1Q9NQ30 184 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 CYTL1Q9NRR1 136 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 TNFRSF19Q9NS68 423 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms