RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TRAV25A0A0B4J276 109 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 A0A0B4J2A0 478 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 C3orf85A0A1B0GTC6 90 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 A0A1B0GW64 132 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 CGB1A6NKQ9 187 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 G3V4G9 280 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 K7EMT4 169 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 OVOL1O14753 267 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 GGCTO75223 188 aaKnown RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 SNAPC5O75971 98 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 S1PR2O95136 353 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 PMP2P02689 132 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 NHLRC4P0CG21 123 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 TRAPPC2P0DI81 140 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 TRAPPC2BP0DI82 140 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 C8orf88P0DMB2 117 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 PTHLHP12272 177 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 ANXA3P12429 323 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 IGLL1P15814 213 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 HOXD3P31249 432 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 LPAR6P43657 344 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 PIGPP57054 158 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 TPPP2P59282 170 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 FXYD4P59646 89 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 GNB1P62873 340 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 VAMP2P63027 116 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 RHOGP84095 191 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 PRCDQ00LT1 54 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 ATP5G2Q06055 141 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 KLF9Q13886 244 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 IL18Q14116 193 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 TNXAQ16473 311 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 TMEM128Q5BJH2 165 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 SPANXN2Q5MJ10 180 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 TBC1D26Q86UD7 250 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 NOXA1Q86UR1 476 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 Q8N402 240 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 DMBX1Q8NFW5 382 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 OR9G4Q8NGQ1 327 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 GRPEL2Q8TAA5 225 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF502Q8TBZ5 544 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 GLYATL2Q8WU03 294 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 RBPMSQ93062 196 aaKnown RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 MRGPRFQ96AM1 343 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 BSCL2Q96G97 398 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 FAM110AQ9BQ89 295 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 THAP7Q9BT49 309 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 FAM103A1Q9BTL3 118 aaKnown RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 C6orf62Q9GZU0 229 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 ALX4Q9H161 411 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 C5orf66Q9H5L9 145 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 TECRQ9NZ01 308 aaKnown RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 COPZ2Q9P299 210 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 PEMTQ9UBM1 199 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 SHPKQ9UHJ6 478 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 LINC00527Q9UJ94 153 aa3.74□□□□□ -1.81
PTCD3-213ENST00000480102 LSM4Q9Y4Z0 139 aaKnown RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 F11RQ9Y624 299 aaKnown RBP3.74□□□□□ -1.81
PTCD3-213ENST00000480102 IGHV4OR15-8A0A075B7B6 117 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 A0A087WW49 117 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 TEX13DA0A0J9YY54 714 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 TEX50A0A1B0GTY4 177 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 MEIS3P1A6NDR6 274 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 CRYM-AS1A6NIL9 109 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 SEC14L6B5MCN3 397 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 FAM90A26D6RGX4 464 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 BMPR1BO00238 502 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 KRASP01116 189 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 IGKV1-39P01597 117 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 IGKV1D-39P04432 117 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 MYOD1P15172 320 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 SUB1P53999 127 aaKnown RBP eCLIP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 TIRAPP58753 221 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 SPCS3P61009 180 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 ERHP84090 104 aaKnown RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 WT1-ASQ06250 92 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 EXOSC2Q13868 293 aaKnown RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF79Q15937 498 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 C15orf32Q32M92 178 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 NMSQ5H8A3 153 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 IL34Q6ZMJ4 242 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 IDO2Q6ZQW0 420 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 C18orf65Q6ZTR6 163 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 H2BFWTQ7Z2G1 175 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 SGPP2Q8IWX5 399 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 VKORC1L1Q8N0U8 176 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 OR4D10Q8NGI6 311 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 OR4C16Q8NGL9 310 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 OR13C8Q8NGS7 320 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 RNASEH2CQ8TDP1 164 aaKnown RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 DCUN1D4Q92564 292 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 DLX4Q92988 240 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 EEF1AKMT3Q96AZ1 226 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 RNF125Q96EQ8 232 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 RRNAD1Q96FB5 475 aaKnown RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 OR4C12Q96R67 309 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 CLCC1Q96S66 551 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 PHB2Q99623 299 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 B9D2Q9BPU9 175 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 RTBDNQ9BSG5 229 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms