RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 NXF2Q9GZY0 626 aaKnown RBP6.89□□□□□ -1.31
GPNMB-211ENST00000479625 FKBP14Q9NWM8 211 aa6.89□□□□□ -1.31
GPNMB-211ENST00000479625 NSG2Q9Y328 171 aa6.89□□□□□ -1.31
GPNMB-211ENST00000479625 V9GY05 133 aa6.89□□□□□ -1.31
GPNMB-211ENST00000479625 TRAV2A0A0B4J234 112 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 K7EQG2 157 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 RBFOX2O43251 390 aaKnown RBP eCLIP6.88□□□□□ -1.31
GPNMB-211ENST00000479625 ARL6IP5O75915 188 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 HPRT1P00492 218 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 NQO2P16083 231 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 NPY1RP25929 384 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 SPHARQ15513 63 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 TOMM20LQ6UXN7 152 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 ZNF367Q7RTV3 350 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 OR13F1Q8NGS4 319 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 OR51H1Q8NH63 302 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 UFD1Q92890 307 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 GINS3Q9BRX5 216 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 DCSTAMPQ9H295 470 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 S100A14Q9HCY8 104 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 NDUFA4L2Q9NRX3 87 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
GPNMB-211ENST00000479625 TMEM235A6NFC5 223 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 NOTOA8MTQ0 251 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 I3L2K1 104 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 CTXN2P0C2S0 81 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 INAFM2P0DMQ5 153 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 MFAP4P55083 255 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 FABP5Q01469 135 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 TMEM88Q6PEY1 159 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 CNIH2Q6PI25 160 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 HSD17B13Q7Z5P4 300 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-211ENST00000479625 C6orf223Q8N319 242 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 OR1L8Q8NGR8 309 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 AIFM2Q9BRQ8 373 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 CENPOQ9BU64 300 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 ATG5Q9H1Y0 275 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 PLCXD1Q9NUJ7 323 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 ANXA10Q9UJ72 324 aa6.87□□□□□ -1.31
GPNMB-211ENST00000479625 HMCN2Q8NDA2 5059 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 A0A1B0GU03 582 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 SSX5O60225 188 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 GNG7O60262 68 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 ATP5HO75947 161 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 MT-CO2P00403 227 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 FCGR2CP31995 323 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 FXYD4P59646 89 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 CATR1Q13166 79 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 CDNFQ49AH0 187 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 HACD4Q5VWC8 232 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 C8orf59Q8N0T1 100 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-211ENST00000479625 DUSP18Q8NEJ0 188 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 PINX1Q96BK5 328 aaKnown RBP6.86□□□□□ -1.31
GPNMB-211ENST00000479625 GRAMD2BQ96HH9 432 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 YTHDF1Q9BYJ9 559 aaKnown RBP6.86□□□□□ -1.31
GPNMB-211ENST00000479625 OR51B2Q9Y5P1 312 aa6.86□□□□□ -1.31
GPNMB-211ENST00000479625 PUS1Q9Y606 427 aaKnown RBP eCLIP6.86□□□□□ -1.31
GPNMB-211ENST00000479625 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
GPNMB-211ENST00000479625 NBDYA0A0U1RRE5 68 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 SMIM30A4D0T7 59 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 MARCH11A6NNE9 402 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 CD5P06127 495 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 FGF2P09038 288 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 SPART-AS1P0CW21 52 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 HSMCR30P0CW71 290 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 RCN1Q15293 331 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 PSMG4Q5JS54 123 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 FAM222AQ5U5X8 452 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 AADACL3Q5VUY0 350 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 ZNF818PQ6ZRF7 136 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 DHRSXQ8N5I4 330 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 OR1P1Q8NH06 330 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 DCANP1Q8TF63 244 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 FAM210BQ96KR6 192 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 SLC5A7Q9GZV3 580 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 PLEKHA2Q9HB19 425 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 COMMD9Q9P000 198 aa6.85□□□□□ -1.31
GPNMB-211ENST00000479625 IGHV3OR16-12A0A075B7B8 117 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 METTL21EPA6NDL7 271 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 IFITM5A6NNB3 132 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 PTGES3LE9PB15 166 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 PPYP01298 95 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 FCER2P06734 321 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 PI3P19957 117 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 G6PCP35575 357 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 P2RY1P47900 373 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 GNG2P59768 71 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 ERVK-16P61578 105 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 SRSF3P84103 164 aaKnown RBP6.84□□□□□ -1.31
GPNMB-211ENST00000479625 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 MSMO1Q15800 293 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 ZNF600Q6ZNG1 722 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 TMEM17Q86X19 198 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 ZNRF2Q8NHG8 242 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 RAB40CQ96S21 281 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 TXN2Q99757 166 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 NIPSNAP3BQ9BS92 247 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 TMEM231Q9H6L2 316 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms