RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TEX36Q5VZQ5 186 aa8.78□□□□□ -1
VPS52-217ENST00000478934 RUSC1-AS1Q66K80 236 aa8.78□□□□□ -1
VPS52-217ENST00000478934 NABP2Q9BQ15 211 aa8.78□□□□□ -1
VPS52-217ENST00000478934 ABCA4P78363 2273 aa8.77□□□□□ -1
VPS52-217ENST00000478934 hADV38S2A0JD32 116 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 LYNX1G3V0Z9 82 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 ITGB1BP1O14713 200 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 CA1P00915 261 aaPredicted RBP8.77□□□□□ -1.01
VPS52-217ENST00000478934 REG1AP05451 166 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 LYNX1P0DP58 116 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 LINC00310P59036 64 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 LCN2P80188 198 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 PRCDQ00LT1 54 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 PQLC2Q6ZP29 291 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 OR8I2Q8N0Y5 310 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.77□□□□□ -1.01
VPS52-217ENST00000478934 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 HARBI1Q96MB7 349 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 TPSG1Q9NRR2 321 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 FKBP11Q9NYL4 201 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 CTSZQ9UBR2 303 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 SLC45A2Q9UMX9 530 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 ZNF705FA8MVS1 300 aaPredicted RBP8.77□□□□□ -1.01
VPS52-217ENST00000478934 ZNF705DP0CH99 300 aaPredicted RBP8.77□□□□□ -1.01
VPS52-217ENST00000478934 ZNF705BP0CI00 300 aaPredicted RBP8.77□□□□□ -1.01
VPS52-217ENST00000478934 RPL29P47914 159 aaKnown RBP8.77□□□□□ -1.01
VPS52-217ENST00000478934 TDGF1P3P51864 188 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 FOXL1Q12952 345 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 RTL8BQ17RB0 113 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 CENPWQ5EE01 88 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 CORO2AQ92828 525 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 MRPL18Q9H0U6 180 aaKnown RBP8.77□□□□□ -1.01
VPS52-217ENST00000478934 SAP30LQ9HAJ7 183 aa8.77□□□□□ -1.01
VPS52-217ENST00000478934 H0YJW9 148 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 GCGP01275 180 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 RNASE2P10153 161 aaKnown RBP8.76□□□□□ -1.01
VPS52-217ENST00000478934 TMEM249Q2WGJ8 235 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 GFRALQ6UXV0 394 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 OR1L6Q8NGR2 347 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 EAF1Q96JC9 268 aaPredicted RBP8.76□□□□□ -1.01
VPS52-217ENST00000478934 MS4A10Q96PG2 267 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 UHRF2Q96PU4 802 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 FAM103A1Q9BTL3 118 aaKnown RBP8.76□□□□□ -1.01
VPS52-217ENST00000478934 LINC00574Q9H8X3 128 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 MRPL36Q9P0J6 103 aaKnown RBP8.76□□□□□ -1.01
VPS52-217ENST00000478934 PRNDQ9UKY0 176 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 POLR3KQ9Y2Y1 108 aaPredicted RBP8.76□□□□□ -1.01
VPS52-217ENST00000478934 LINC00312Q9Y6C7 94 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 CGB1A6NKQ9 187 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 FCN1O00602 326 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 PRRG2O14669 202 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 SERF1AO75920 110 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 PLAUP00749 431 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 PRB4P10163 310 aaPredicted RBP8.76□□□□□ -1.01
VPS52-217ENST00000478934 CDKN1AP38936 164 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 SUMO1P63165 101 aaKnown RBP8.76□□□□□ -1.01
VPS52-217ENST00000478934 POU2AF1Q16633 256 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 C3orf36Q3SXR2 165 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 ZNF833PQ6ZTB9 187 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 TGIF2LXQ8IUE1 241 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 NUP37Q8NFH4 326 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 ZNF714Q96N38 554 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 NCOR1P1Q9H4R4 102 aa8.76□□□□□ -1.01
VPS52-217ENST00000478934 SNURFLB1AK76 121 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 GGTLC3B5MD39 225 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 TMEM178BH3BS89 294 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 MGST1P10620 155 aaKnown RBP8.75□□□□□ -1.01
VPS52-217ENST00000478934 CD99P14209 185 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 WT1-ASQ06250 92 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 ST6GALNAC3Q8NDV1 305 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 CMTM2Q8TAZ6 248 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 IGFBPL1Q8WX77 278 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 ADTRPQ96IZ2 230 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 SGK494Q96LW2 274 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 RNF114Q9Y508 228 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 PPIAL4EA0A075B759 164 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 IGHV3-21A0A0B4J1V1 117 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 HELTA6NFD8 242 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 PPIAL4DF5H284 164 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 MKRN2OSH3BPM6 223 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 PPIAL4FP0DN26 164 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 TNFRSF1AP19438 455 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 RAB4BP61018 213 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 RAB31Q13636 194 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 Q6ZWC4 215 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 MMD2Q8IY49 270 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 OR10X1Q8NGY0 326 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 TBX15Q96SF7 602 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 FNDC4Q9H6D8 234 aaPredicted RBP8.75□□□□□ -1.01
VPS52-217ENST00000478934 IL36BQ9NZH7 164 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 PPIAL4AQ9Y536 164 aa8.75□□□□□ -1.01
VPS52-217ENST00000478934 PTPRQQ9UMZ3 2332 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 NKX6-3A6NJ46 265 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 PYYP10082 97 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 PAX1P15863 534 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 GNG4P50150 75 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 MRPL54Q6P161 138 aaKnown RBP8.74□□□□□ -1.01
VPS52-217ENST00000478934 TOMM20LQ6UXN7 152 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 NDUFAF3Q9BU61 184 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms