RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 OR5W2Q8NH69 310 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 AKR7LQ8NHP1 331 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 NUBPLQ8TB37 319 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 C16orf78Q8WTQ4 265 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 SMIM4Q8WVI0 70 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 LINC00052Q96N35 136 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR51I1Q9H343 314 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF442Q9H7R0 627 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 TREM1Q9NP99 234 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 PRTFDC1Q9NRG1 225 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 SLC22A14Q9Y267 594 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 NPTNQ9Y639 398 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 A0A1W2PPV9 198 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 PLAC8L1A1L4L8 177 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF716A6NP11 495 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 MCRIP1C9JLW8 97 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 J3QLW9 94 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 M0R129 80 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF593O00488 134 aaPredicted RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 GOSR2O14653 212 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 NUPL2O15504 423 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ATG12O94817 140 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 IFNA17P01571 189 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 GAPDHP04406 335 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 GLAP06280 429 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 CD2P06729 351 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 FABP1P07148 127 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 CD3GP09693 182 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF735P0CB33 412 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 AKAIN1P0CW23 69 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 PET100P0DJ07 73 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 SMIM10L1P0DMW3 83 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 C1GALT1C1LP0DN25 315 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 TPT1P13693 172 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 S100A2P29034 98 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 CFHR2P36980 270 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 HCCSP53701 268 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 RGS8P57771 180 aaPredicted RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 HBA1P69905 142 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 CDK5Q00535 292 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 SSBP1Q04837 148 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 TNFRSF9Q07011 255 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 EIF4EBP1Q13541 118 aaPredicted RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 PEA15Q15121 130 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 GABRA6Q16445 453 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ACSM3Q53FZ2 586 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 RPL22L1Q6P5R6 122 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 SMARCD3Q6STE5 483 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ALKAL2Q6UX46 152 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 COMMD6Q7Z4G1 85 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ABHD12BQ7Z5M8 362 aaPredicted RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 PUSL1Q8N0Z8 303 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 GTPBP8Q8N3Z3 284 aaPredicted RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF561Q8N587 486 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 CYB561D1Q8N8Q1 229 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 Q8N976 141 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 OR5D16Q8NGK9 328 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 OR5AK3PQ8NH89 298 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 SFXN5Q8TD22 340 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF721Q8TF20 911 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 SMIM10Q96HG1 83 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 AIF1LQ9BQI0 150 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 SLC25A21Q9BQT8 299 aaPredicted RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 AICDAQ9GZX7 198 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 PLEKHA1Q9HB21 404 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 SMCO4Q9NRQ5 59 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 MYEF2Q9P2K5 600 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 FBXL3Q9UKT7 428 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 MMACHCQ9Y4U1 282 aa2.94□□□□□ -1.94
CCDC171-207ENST00000478913 F11RQ9Y624 299 aaKnown RBP2.94□□□□□ -1.94
CCDC171-207ENST00000478913 IGKV1D-13A0A0B4J2D9 117 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM218A2RU14 115 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 GGT3PA6NGU5 568 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 RFPL4AA6NLU0 287 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM210A6NLX4 147 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 RFPL4AL1F8VTS6 287 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 PHYHO14832 338 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 OR2A4O95047 310 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 NDUFB6O95139 128 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 MPC2O95563 127 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 EIF4EP06730 217 aaKnown RBP2.93□□□□□ -1.94
CCDC171-207ENST00000478913 KLK1P06870 262 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 NMBP08949 121 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 IGKV1-13P0DP09 117 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 GTF2F2P13984 249 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 SPI1P17947 270 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 CXCL3P19876 107 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 MPIP34949 423 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 CDKN1BP46527 198 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 CAV3P56539 151 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 TCTAP57738 103 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 TAS2R31P59538 309 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 BIKQ13323 160 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF345Q14585 488 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 RHEBQ15382 184 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 CCSMST1Q4G0I0 132 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 CLEC12AQ5QGZ9 265 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 GLT8D1Q68CQ7 371 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 FAM71E1Q6IPT2 247 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 C3orf33Q6P1S2 294 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms