RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 OR10C1Q96KK4 312 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 OR2A7Q96R45 310 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 AIFM2Q9BRQ8 373 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 NMES1Q9C002 83 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 SRD5A3Q9H8P0 318 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 TMEM140Q9NV12 185 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 GSKIPQ9P0R6 139 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 CACNG5Q9UF02 275 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 A0A0G2JRQ6 117 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 A0A1B0GU03 582 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 A0A1W2PN81 502 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 BOLA2-SMG1P6H3BVE0 249 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 SHOXO15266 292 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 SCGB1D2O95969 90 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 SLC25A6P12236 298 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 CHRNA7P36544 502 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 S100A10P60903 97 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 FGL1Q08830 312 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 TMEM177Q53S58 311 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 SSX9Q7RTT3 188 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 OR1S1Q8NH92 325 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 PHLDA1Q8WV24 401 aaPredicted RBP7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 SEC22AQ96IW7 307 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 RHOVQ96L33 236 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 OVOL2Q9BRP0 275 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 WFDC10AQ9H1F0 79 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 FBXO7Q9Y3I1 522 aa7.32□□□□□ -1.24
SMARCB1-206ENST00000477836 SMLR1H3BR10 107 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 RBMXL2O75526 392 aaKnown RBP7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 SPDEFO95238 335 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 P0C879 139 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 CD1BP29016 333 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 OR2B8PP59922 312 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 POU2AF1Q16633 256 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 ECSCRQ19T08 205 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 IZUMO4Q1ZYL8 232 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 VMA21Q3ZAQ7 101 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 OR4A47Q6IF82 309 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 VKORC1L1Q8N0U8 176 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 OR4D5Q8NGN0 318 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 OR9G4Q8NGQ1 327 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 VSTM2AQ8TAG5 236 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 PPP1R1CQ8WVI7 109 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 GPR146Q96CH1 333 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 TSNAXQ99598 290 aaKnown RBP7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 COA4Q9NYJ1 87 aa7.31□□□□□ -1.24
SMARCB1-206ENST00000477836 FXYD6-FXYD2A0A087WZ82 144 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 PRSS29PA6NIE9 313 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 WRBO00258 174 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 SOX15O60248 233 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 SNAPC5O75971 98 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 NDUFB8O95169 186 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 C1QBP02746 253 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 CD7P09564 240 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 SAA1P0DJI8 122 aaPredicted RBP7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 PSMB6P28072 239 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 NKX2-1P43699 371 aaPredicted RBP7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 LGALS7P47929 136 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 UBE2KP61086 200 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 RPS16P62249 146 aaKnown RBP7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 TNFRSF9Q07011 255 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 IL34Q6ZMJ4 242 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 OR4A16Q8NH70 328 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 THAP6Q8TBB0 222 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 WDR89Q96FK6 387 aaPredicted RBP7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 BET1LQ9NYM9 111 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 LSM5Q9Y4Y9 91 aaKnown RBP7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 LRP1BQ9NZR2 4599 aa7.3□□□□□ -1.24
SMARCB1-206ENST00000477836 TRAV14DV4A0A0A6YYC5 116 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 IGHV7-81A0A0B4J1V7 117 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 C15orf61A6NNL5 157 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 OR11H12B2RN74 326 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 FAM90A26D6RGX4 464 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 G3V3Q6 166 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 K7EPK0 472 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 ST8SIA3O43173 380 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 KBTBD11O94819 623 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 NXPH3O95157 252 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 MPC2O95563 127 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 MBPP02686 304 aaPredicted RBP7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 OR9G9P0C7N8 305 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 EIF2B2P49770 351 aaKnown RBP7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 RAB32Q13637 225 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 MMDQ15546 238 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 PRSS54Q6PEW0 395 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 MAPKAPK5-AS1Q8N8E1 139 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 OR4A5Q8NH83 315 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 MS4A10Q96PG2 267 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 RNF5Q99942 180 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 MBD2Q9UBB5 411 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 CACFD1Q9UGQ2 172 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 PRNDQ9UKY0 176 aa7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 FOXA2Q9Y261 457 aaPredicted RBP7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 APOBP04114 4563 aaKnown RBP7.29□□□□□ -1.24
SMARCB1-206ENST00000477836 SRRM4A7MD48 611 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 UPK2O00526 184 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 NBR2O15453 112 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 SSSCA1O60232 199 aa7.28□□□□□ -1.24
SMARCB1-206ENST00000477836 PITX3O75364 302 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms