RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SIRT7Q9NRC8 400 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 SMCO4Q9NRQ5 59 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 SLC45A2Q9UMX9 530 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 NAV2Q8IVL1 2488 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 HIVEP3Q5T1R4 2406 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 MALRD1Q5VYJ5 2156 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 IGLC7A0M8Q6 106 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 C9JQL5 133 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 F6UZH7 168 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 PDE6DO43924 150 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 NDUFS7O75251 213 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 CLN5O75503 358 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 IGKV1D-33P01593 117 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 IGKV1-33P01594 117 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 PRB1P04280 392 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 CRYGCP07315 174 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 STAG3L2P0CL84 134 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 STAG3L3P0CL85 134 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 SLC25A16P16260 332 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 HOXB4P17483 251 aaPredicted RBP6.36□□□□□ -1.39
VMA21-203ENST00000477649 ZFP36P26651 326 aaKnown RBP6.36□□□□□ -1.39
VMA21-203ENST00000477649 ATP5J2P56134 94 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 MEF2BQ02080 365 aaPredicted RBP6.36□□□□□ -1.39
VMA21-203ENST00000477649 WT1-ASQ06250 92 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 PAX8Q06710 450 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 GAMTQ14353 236 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 MMDQ15546 238 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 GUCA2BQ16661 112 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 HAGHQ16775 308 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 MRGPRG-AS1Q2M3A8 158 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 PQLC2Q6ZP29 291 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 S100A7AQ86SG5 101 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 STPG3Q8N7X2 389 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 OR1L4Q8NGR5 311 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 RXFP4Q8TDU9 374 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 PFDN5Q99471 154 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 VSIRQ9H7M9 311 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 SLC25A22Q9H936 323 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 TMEM167BQ9NRX6 74 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 F11RQ9Y624 299 aaKnown RBP6.36□□□□□ -1.39
VMA21-203ENST00000477649 RFNGQ9Y644 331 aa6.36□□□□□ -1.39
VMA21-203ENST00000477649 YLPM1P49750 1951 aaKnown RBP6.35□□□□□ -1.39
VMA21-203ENST00000477649 A0A087WWC5 75 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
VMA21-203ENST00000477649 IGHV3-72A0A0B4J1Y9 119 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 A0A1B0GV50 99 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 TCRBV4S1A1TA0A5B7 111 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 CXorf65A6NEN9 183 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 CGB1A6NKQ9 187 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 ZFP92A6NM28 416 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 DNASE2O00115 360 aaPredicted RBP6.35□□□□□ -1.39
VMA21-203ENST00000477649 SCGB2A1O75556 95 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 SCO1O75880 301 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 YIF1AO95070 293 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 CNIH1O95406 144 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 OPN1MWP04001 364 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 OPN1MW2P0DN77 364 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 OPN1MW3P0DN78 364 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 BPIFB3P59826 476 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 LCN2P80188 198 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 C5orf64Q2M2E5 130 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 MIC13Q5XKP0 118 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 ZNF562Q6V9R5 426 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 CYP2G1PQ6ZSU1 146 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 Q8N6K4 173 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 TMEM116Q8NCL8 245 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 STXBP6Q8NFX7 210 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 OR10W1Q8NGF6 305 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 SRSF12Q8WXF0 261 aaKnown RBP6.35□□□□□ -1.39
VMA21-203ENST00000477649 TVP23CQ96ET8 276 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 EAF1Q96JC9 268 aaPredicted RBP6.35□□□□□ -1.39
VMA21-203ENST00000477649 TMEM68Q96MH6 324 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 TRGV9Q99603 122 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 RARRES2Q99969 163 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 TECRQ9NZ01 308 aaKnown RBP6.35□□□□□ -1.39
VMA21-203ENST00000477649 RNF24Q9Y225 148 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 ZNF462Q96JM2 2506 aa6.35□□□□□ -1.39
VMA21-203ENST00000477649 ABCA4P78363 2273 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 TRAV30A0A087WSZ9 112 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 NPIPB5A8MRT5 1133 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 TEX22C9J3V5 150 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 H3BQ15 152 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 M0R036 132 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 OR5G3P0C626 314 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 LINC00869P0C866 280 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 MYOD1P15172 320 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 OR10J1P30954 320 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 S100A7P31151 101 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 HES1Q14469 280 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 LINC01559Q495D7 138 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 ATRAIDQ6UW56 229 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 C15orf54Q8N8G6 183 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 CYB561D1Q8N8Q1 229 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 C1orf159Q96HA4 380 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 RITA1Q96K30 269 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 TBX15Q96SF7 602 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 SSX3Q99909 188 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 TCEAL7Q9BRU2 100 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 FBXL15Q9H469 300 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 TMEM242Q9NWH2 141 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms