RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SP1P08047 785 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 TRIB1Q96RU8 372 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 HES7Q9BYE0 225 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 TMEM191AQ9H0A3 160 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 PLEKHA3Q9HB20 300 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 PEF1Q9UBV8 284 aaKnown RBP12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 TCF19Q9Y242 345 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 KLK10O43240 276 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 MGST1P10620 155 aaKnown RBP12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 DEFB109BQ30KR1 87 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 MIR17HGQ75NE6 70 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 BCL2L2Q92843 193 aaPredicted RBP12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 MS4A6AQ9H2W1 248 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 CIDEAO60543 219 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 MDS2Q8NDY4 140 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 NEUROG1Q92886 237 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 PMCHL2Q9BQD1 86 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 SCNM1Q9BWG6 230 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 RNF24Q9Y225 148 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 PSPNO60542 156 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 NUDT3O95989 172 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 SPINK2P20155 84 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 SSTR5P35346 364 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 GPR12P47775 334 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 FOXF2Q12947 444 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 ZNF766Q5HY98 468 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 TMEM178AQ8NBL3 297 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 FDCSPQ8NFU4 85 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 NUDT11Q96G61 164 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 TTTY12Q9BZ98 90 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
CLSTN1-205ENST00000477264 GGTLC3B5MD39 225 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 TMEM238C9JI98 176 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 C3orf80F5H4A9 247 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 SPINT2O43291 252 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 FCGR3BO75015 233 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 MEOX1P50221 254 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 TCF24Q7RTU0 167 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 NABP2Q9BQ15 211 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 MRPL32Q9BYC8 188 aaKnown RBP12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 ENY2Q9NPA8 101 aa12.52□□□□□ -0.4
CLSTN1-205ENST00000477264 OR2T8A6NH00 312 aa12.52□□□□□ -0.41
CLSTN1-205ENST00000477264 C15orf61A6NNL5 157 aa12.52□□□□□ -0.41
CLSTN1-205ENST00000477264 CA7P43166 264 aa12.52□□□□□ -0.41
CLSTN1-205ENST00000477264 MFAP2P55001 183 aa12.52□□□□□ -0.41
CLSTN1-205ENST00000477264 SLC25A40Q8TBP6 338 aa12.52□□□□□ -0.41
CLSTN1-205ENST00000477264 COQ2Q96H96 371 aa12.52□□□□□ -0.41
CLSTN1-205ENST00000477264 OR5AL1P0C617 328 aa12.51□□□□□ -0.41
CLSTN1-205ENST00000477264 AMMECR1LQ6DCA0 310 aa12.51□□□□□ -0.41
CLSTN1-205ENST00000477264 ABHD12Q8N2K0 398 aa12.51□□□□□ -0.41
CLSTN1-205ENST00000477264 SOX21Q9Y651 276 aaPredicted RBP12.51□□□□□ -0.41
CLSTN1-205ENST00000477264 SYS1-DBNDD2H3BUS1 97 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 ZNHIT1O43257 154 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 OR7C2O60412 319 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 IGFBP2P18065 325 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 MAGEA5P43359 124 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 FAM120AOSQ5T036 256 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 SCRT2Q9NQ03 307 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 TMEM140Q9NV12 185 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 FOXA2Q9Y261 457 aaPredicted RBP12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 FREM1Q5H8C1 2179 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 MUC21A0A0G2JKD1 596 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 MUC21A0A140T8X8 626 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 GAGE12BA1L429 117 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 SMPD2O60906 423 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 ATP5IP56385 69 aaPredicted RBP12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 SEC11AP67812 179 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 PSG9Q00887 426 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 AESQ08117 197 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 TBC1D28Q2M2D7 210 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 TUSC5Q8IXB3 177 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 GCM1Q9NP62 436 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 JPT1Q9UK76 154 aa12.5□□□□□ -0.41
CLSTN1-205ENST00000477264 A0A1B0GXF2 115 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 HIST1H1EP10412 219 aaKnown RBP12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 FOXG1P55316 489 aaPredicted RBP12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 MRPL49Q13405 166 aaKnown RBP12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 FAM214BQ7L5A3 538 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 TMEM251Q8N6I4 163 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 NUP35Q8NFH5 326 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 OR4S2Q8NH73 311 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 Q8TCH9 128 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 ZNF503Q96F45 646 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 CLCF1Q9UBD9 225 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 IQCF6A8MYZ5 107 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 ACTL6BO94805 426 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 TMEM11P17152 192 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms