RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 ST8SIA3O43173 380 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 MT-CO2P00403 227 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 AKR1C2P52895 323 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 ZNF114Q8NC26 417 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 ZFAND1Q8TCF1 268 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 RAB2BQ8WUD1 216 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 PINX1Q96BK5 328 aaKnown RBP8.33□□□□□ -1.08
PTPRN-213ENST00000476930 DIRAS2Q96HU8 199 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 RTBDNQ9BSG5 229 aaPredicted RBP8.33□□□□□ -1.08
PTPRN-213ENST00000476930 C5orf66Q9H5L9 145 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 COPZ2Q9P299 210 aa8.33□□□□□ -1.08
PTPRN-213ENST00000476930 CTSDP07339 412 aaPredicted RBP8.32□□□□□ -1.08
PTPRN-213ENST00000476930 UCP1P25874 307 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 ETV6P41212 452 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 TMBIM6P55061 237 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 MFAP4P55083 255 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 ERHP84090 104 aaKnown RBP8.32□□□□□ -1.08
PTPRN-213ENST00000476930 SSBP1Q04837 148 aaKnown RBP8.32□□□□□ -1.08
PTPRN-213ENST00000476930 IL18Q14116 193 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 ANKRD55Q3KP44 614 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 Q6ZRM9 215 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 CCDC71LQ8N9Z2 235 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 OR4C16Q8NGL9 310 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 SMIM4Q8WVI0 70 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 CCDC59Q9P031 241 aaKnown RBP8.32□□□□□ -1.08
PTPRN-213ENST00000476930 UBQLN2Q9UHD9 624 aa8.32□□□□□ -1.08
PTPRN-213ENST00000476930 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
PTPRN-213ENST00000476930 IGHV3-49A0A0A0MS15 119 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 H3BMQ9 156 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 K7EMT4 169 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 TSPAN4O14817 238 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 CTDSPLO15194 276 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 NUPL2O15504 423 aaKnown RBP8.31□□□□□ -1.08
PTPRN-213ENST00000476930 IFNA17P01571 189 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 OR5AC1P0C628 307 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 FCGR2BP31994 310 aaPredicted RBP8.31□□□□□ -1.08
PTPRN-213ENST00000476930 MRPS10P82664 201 aaKnown RBP8.31□□□□□ -1.08
PTPRN-213ENST00000476930 MEF2DQ14814 521 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 LHFPL5Q8TAF8 219 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 GLYATL2Q8WU03 294 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 TXN2Q99757 166 aa8.31□□□□□ -1.08
PTPRN-213ENST00000476930 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
PTPRN-213ENST00000476930 C6orf62Q9GZU0 229 aaPredicted RBP8.31□□□□□ -1.08
PTPRN-213ENST00000476930 NXF2Q9GZY0 626 aaKnown RBP8.31□□□□□ -1.08
PTPRN-213ENST00000476930 IGHV3OR16-13A0A075B7E8 117 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 LOC102724200A0A096LPH7 203 aaPredicted RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 IGHV3-74A0A0B4J1X5 117 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 C15orf62A8K5M9 175 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 DISC1C4P0D8 188 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 INS-IGF2F8WCM5 200 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 CHEK1O14757 476 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 YIF1AO95070 293 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 CDS2O95674 445 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 AKAIN1P0CW23 69 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 RNASE2P10153 161 aaKnown RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 SNCAP37840 140 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 RPL5P46777 297 aaKnown RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 RELQ04864 619 aaPredicted RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 MLANAQ16655 118 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 ODF3L2Q3SX64 289 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 PVRIGQ6DKI7 326 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 LAMTOR1Q6IAA8 161 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 SELENOHQ8IZQ5 122 aaKnown RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 OR51S1Q8NGJ8 323 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 RRNAD1Q96FB5 475 aaKnown RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 OR10C1Q96KK4 312 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 RNF2Q99496 336 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 BCL7BQ9BQE9 202 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 GGTLC1Q9BX51 225 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 SLIRPQ9GZT3 109 aaKnown RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 TMEM222Q9H0R3 208 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 NAA60Q9H7X0 242 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 MRPL36Q9P0J6 103 aaKnown RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 SMPXQ9UHP9 88 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 GPR132Q9UNW8 380 aa8.3□□□□□ -1.08
PTPRN-213ENST00000476930 C14orf166Q9Y224 244 aaKnown RBP8.3□□□□□ -1.08
PTPRN-213ENST00000476930 IGHV7-4-1A0A0J9YVY3 117 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 TEX13DA0A0J9YY54 714 aaPredicted RBP8.29□□□□□ -1.08
PTPRN-213ENST00000476930 ANKRD20A5PA0PJZ0 165 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 GNG7O60262 68 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 ATG12O94817 140 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 TNFSF8P32971 234 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 HOXA1P49639 335 aaPredicted RBP8.29□□□□□ -1.08
PTPRN-213ENST00000476930 TOMM20LQ6UXN7 152 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 TMEM116Q8NCL8 245 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 RNASE11Q8TAA1 199 aaKnown RBP8.29□□□□□ -1.08
PTPRN-213ENST00000476930 SOSTQ9BQB4 213 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 OVOL2Q9BRP0 275 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 PDCD10Q9BUL8 212 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 RHPN1-AS1Q9BWJ2 59 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 PRR13Q9NZ81 148 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
PTPRN-213ENST00000476930 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 TRAV14DV4A0A0A6YYC5 116 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 CRYM-AS1A6NIL9 109 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 GSTZ1O43708 216 aaPredicted RBP8.28□□□□□ -1.08
PTPRN-213ENST00000476930 B3GALNT1O75752 331 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 TMEM50AO95807 157 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms