RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 NHLRC2Q8NBF2 726 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 Q8TCH9 128 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 GVINP1Q7Z2Y8 2422 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 TCTAP57738 103 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 RHOGP84095 191 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 C5orf47Q569G3 176 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 TMEM251Q8N6I4 163 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 PMCHL2Q9BQD1 86 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 MRPS16Q9Y3D3 137 aaKnown RBP6.91□□□□□ -1.3
VAPB-205ENST00000476395 CEP250Q9BV73 2442 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 LINC00473A8K010 186 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 FAM166BA8MTA8 275 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 ZNF207O43670 478 aaKnown RBP6.91□□□□□ -1.3
VAPB-205ENST00000476395 C1orf229Q6ZS94 237 aaPredicted RBP6.91□□□□□ -1.3
VAPB-205ENST00000476395 MDP1Q86V88 176 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 TCTEX1D1Q8N7M0 179 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 COQ2Q96H96 371 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 SFXN3Q9BWM7 321 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 TECRQ9NZ01 308 aaKnown RBP6.91□□□□□ -1.3
VAPB-205ENST00000476395 HCFC1P51610 2035 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 ZNF292O60281 2723 aa6.91□□□□□ -1.3
VAPB-205ENST00000476395 A0A087X0K7 114 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 C17orf98A8MV24 154 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 PRSS46E5RG02 174 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 S1PR2O95136 353 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 GNG3P63215 75 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 ABHD17BQ5VST6 288 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 TMEM136Q6ZRR5 245 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 MTURNQ8N3F0 131 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 ZNF808Q8N4W9 903 aaPredicted RBP6.9□□□□□ -1.3
VAPB-205ENST00000476395 SSBP3Q9BWW4 388 aaPredicted RBP6.9□□□□□ -1.3
VAPB-205ENST00000476395 ARRDC1-AS1Q9H2J1 176 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 TMEM160Q9NX00 188 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 METRNQ9UJH8 293 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 MPC1Q9Y5U8 109 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 V9GYV3 84 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 PRR14LQ5THK1 2151 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 OTOGLQ3ZCN5 2332 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 J3QT63 122 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 ACP1P24666 158 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 PDLIM3Q53GG5 364 aaPredicted RBP6.9□□□□□ -1.3
VAPB-205ENST00000476395 FAM168AQ92567 244 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
VAPB-205ENST00000476395 SPRR3Q9UBC9 169 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 TIMM9Q9Y5J7 89 aa6.9□□□□□ -1.3
VAPB-205ENST00000476395 TSSC4Q9Y5U2 329 aaPredicted RBP6.9□□□□□ -1.3
VAPB-205ENST00000476395 WNT9BO14905 357 aa6.9□□□□□ -1.31
VAPB-205ENST00000476395 MIC13Q5XKP0 118 aa6.9□□□□□ -1.31
VAPB-205ENST00000476395 SSMEM1Q8WWF3 244 aa6.9□□□□□ -1.31
VAPB-205ENST00000476395 OR2V2Q96R30 315 aa6.9□□□□□ -1.31
VAPB-205ENST00000476395 FAM173AQ9BQD7 235 aa6.9□□□□□ -1.31
VAPB-205ENST00000476395 LOXL2Q9Y4K0 774 aa6.9□□□□□ -1.31
VAPB-205ENST00000476395 DSCAML1Q8TD84 2053 aa6.9□□□□□ -1.31
VAPB-205ENST00000476395 C12orf77C9JDV5 145 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 BVES-AS1Q5T3Y7 98 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 KLHDC1Q8N7A1 406 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 OR52L2PQ8NGH6 319 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 BORCS7Q96B45 105 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 TMEM147Q9BVK8 224 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 OR2D2Q9H210 308 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 CDC42EP3Q9UKI2 254 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 LRRC30A6NM36 301 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 CDIPTO14735 213 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 SCGB1A1P11684 91 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 RPL8P62917 257 aaKnown RBP6.89□□□□□ -1.31
VAPB-205ENST00000476395 MDS2Q8NDY4 140 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 OR1N2Q8NGR9 330 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 FNDC4Q9H6D8 234 aaPredicted RBP6.89□□□□□ -1.31
VAPB-205ENST00000476395 CLCF1Q9UBD9 225 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 TRAV9-2A0A087WT02 112 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 C15orf62A8K5M9 175 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 F8WDY8 70 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 NPY1RP25929 384 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 MPV17P39210 176 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 GABRA2P47869 451 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 RPEL1Q2QD12 228 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 LRRC10Q5BKY1 277 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 OR2Z1Q8NG97 314 aa6.89□□□□□ -1.31
VAPB-205ENST00000476395 TIMM8BQ9Y5J9 83 aaPredicted RBP6.89□□□□□ -1.31
VAPB-205ENST00000476395 FAM181BA6NEQ2 426 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 H0YJW9 148 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 CORTO00230 105 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 MGST1P10620 155 aaKnown RBP6.88□□□□□ -1.31
VAPB-205ENST00000476395 OR1C1Q15619 314 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 GDF5OSQ5U4N7 250 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 ZNF439Q8NDP4 499 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 OR10P1Q8NGE3 313 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 C18orf32Q8TCD1 76 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 KCNIP2Q9NS61 270 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 ARL2-SNX15V9GYD0 113 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 LRP5LA4QPB2 252 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 FAM90A26D6RGX4 464 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 UQCRFS1P47985 274 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 RNASEKQ6P5S7 137 aaKnown RBP6.88□□□□□ -1.31
VAPB-205ENST00000476395 PQLC2Q6ZP29 291 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 OR8B2Q96RD0 313 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 MGAQ8IWI9 3026 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 M0R2Z0 102 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms