RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 IGHV3-74A0A0B4J1X5 117 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 IGHV3-48P01763 117 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 APOHP02749 345 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-228ENST00000476267 EIF4EP06730 217 aaKnown RBP9.58□□□□□ -0.88
MRPL55-228ENST00000476267 P0C879 139 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 HLA-DMAP28067 261 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 PRSS3P35030 304 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 TFPI2P48307 235 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 UCP3P55916 312 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 NANOS2P60321 138 aaKnown RBP9.58□□□□□ -0.88
MRPL55-228ENST00000476267 TOMM20LQ6UXN7 152 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 TSPAN14Q8NG11 270 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 ST8SIA2Q92186 375 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 MISP3Q96FF7 219 aa9.58□□□□□ -0.88
MRPL55-228ENST00000476267 DNAH17Q9UFH2 4485 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 INS-IGF2F8WCM5 200 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 YIF1AO95070 293 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 HSPE1P61604 102 aaKnown RBP9.57□□□□□ -0.88
MRPL55-228ENST00000476267 PRR20EP86478 221 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 PRR20CP86479 221 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 PRR20DP86480 221 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 PRR20BP86481 221 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 PRR20AP86496 221 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 LPCAT3Q6P1A2 487 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 TCF24Q7RTU0 167 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 GBGT1Q8N5D6 347 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 FAM24BQ8N5W8 94 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 OR11H2Q8NH07 326 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 MRGPRFQ96AM1 343 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 MS4A6AQ9H2W1 248 aa9.57□□□□□ -0.88
MRPL55-228ENST00000476267 TRAV2A0A0B4J234 112 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 A0A1B0GU03 582 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 GNG7O60262 68 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 CD5P06127 495 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
MRPL55-228ENST00000476267 IZUMO4Q1ZYL8 232 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 H2BFWTQ7Z2G1 175 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 Q8NAQ8 132 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 OR4A16Q8NH70 328 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 C11orf45Q8TAV5 145 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 MFFQ9GZY8 342 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 SCPEP1Q9HB40 452 aa9.56□□□□□ -0.88
MRPL55-228ENST00000476267 DFFBO76075 338 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 CA1P00915 261 aaPredicted RBP9.55□□□□□ -0.88
MRPL55-228ENST00000476267 IGKV1-5P01602 117 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 RND3P61587 244 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 TSPAN5P62079 268 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 RBMS2Q15434 407 aaKnown RBP9.55□□□□□ -0.88
MRPL55-228ENST00000476267 ZNF600Q6ZNG1 722 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 LHFPL1Q86WI0 220 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 PINX1Q96BK5 328 aaKnown RBP9.55□□□□□ -0.88
MRPL55-228ENST00000476267 CMTM3Q96MX0 182 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
MRPL55-228ENST00000476267 MRPL36Q9P0J6 103 aaKnown RBP9.55□□□□□ -0.88
MRPL55-228ENST00000476267 PUS1Q9Y606 427 aaKnown RBP eCLIP9.55□□□□□ -0.88
MRPL55-228ENST00000476267 A0A0B4J293 547 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 TMEM50AO95807 157 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 APOA1P02647 267 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 RCVRNP35243 200 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 DEFB131AP59861 70 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 LSM3P62310 102 aaKnown RBP9.54□□□□□ -0.88
MRPL55-228ENST00000476267 PAFAH1B2P68402 229 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 ERHP84090 104 aaKnown RBP9.54□□□□□ -0.88
MRPL55-228ENST00000476267 SPINK9Q5DT21 86 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 LEMD1Q68G75 181 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 FBXL17Q9UF56 701 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 APLNQ9ULZ1 77 aa9.54□□□□□ -0.88
MRPL55-228ENST00000476267 IGHV3-66A0A0C4DH42 116 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 DEFB4AO15263 64 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 RNASE2P10153 161 aaKnown RBP9.53□□□□□ -0.88
MRPL55-228ENST00000476267 S100GP29377 79 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 NPBWR1P48145 328 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 TCTAP57738 103 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 TMEM187Q14656 261 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 BSXQ3C1V8 233 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 TRPT1Q86TN4 253 aaKnown RBP9.53□□□□□ -0.88
MRPL55-228ENST00000476267 DUSP18Q8NEJ0 188 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 C2CD4CQ8TF44 421 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 TP53RKQ96S44 253 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 HRH4Q9H3N8 390 aa9.53□□□□□ -0.88
MRPL55-228ENST00000476267 FNDC4Q9H6D8 234 aaPredicted RBP9.53□□□□□ -0.88
MRPL55-228ENST00000476267 K7EQG2 157 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 M0QYG6 137 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
MRPL55-228ENST00000476267 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 ELK1P19419 428 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 C4BPBP20851 252 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 CRYBB3P26998 211 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
MRPL55-228ENST00000476267 SNX29P2Q8IUI4 249 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 DCANP1Q8TF63 244 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 ZNF486Q96H40 463 aaPredicted RBP9.52□□□□□ -0.89
MRPL55-228ENST00000476267 COMMD3Q9UBI1 195 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 DYNC1H1Q14204 4646 aaKnown RBP9.52□□□□□ -0.89
MRPL55-228ENST00000476267 PKD1P98161 4303 aa9.52□□□□□ -0.89
MRPL55-228ENST00000476267 A0A0G2JRQ6 117 aa9.51□□□□□ -0.89
MRPL55-228ENST00000476267 ZNF705EA8MWA4 302 aaPredicted RBP9.51□□□□□ -0.89
MRPL55-228ENST00000476267 CORTO00230 105 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms