RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZNF674Q2M3X9 581 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 HCP5Q6MZN7 132 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 SEPSECSQ9HD40 501 aaKnown RBP12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 C11orf94C9JXX5 98 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 UBE2G2P60604 165 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 SNRPEP62304 92 aaKnown RBP12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 PLGLAQ15195 96 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 VMO1Q7Z5L0 202 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 KIR3DL3Q8N743 410 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 NANPQ8TBE9 248 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 RPUSD4Q96CM3 377 aaKnown RBP12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 SMIM7Q9BQ49 75 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 A0A087WWC5 75 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 IGLC7A0M8Q6 106 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 ODF3BA8MYP8 253 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 B4DEV8 164 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 VENTXO95231 258 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 LCN2P80188 198 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 CST9LP1Q5W188 147 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 LHFPL4Q7Z7J7 247 aa12.32□□□□□ -0.44
RPUSD3-215ENST00000475470 NDUFS6O75380 124 aaKnown RBP12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 MT-CO2P00403 227 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 MT-ND4LP03901 98 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 GATA2P23769 480 aaPredicted RBP12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 RAB5BP61020 215 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 FAM78BQ5VT40 261 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 SPATA31B1PQ5VZV4 182 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 FAM24BQ8N5W8 94 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 FNDC4Q9H6D8 234 aaPredicted RBP12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 OVOL3O00110 214 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 APELAP0DMC3 54 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
RPUSD3-215ENST00000475470 C1orf196B1AJZ1 125 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 PLXNB1O43157 2135 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 AREGP15514 252 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 MMDQ15546 238 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 NPIPB3Q92617 1050 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 PARLQ9H300 379 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 NAT8Q9UHE5 227 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 IGHV3-48P01763 117 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 FOLR2P14207 255 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 GCHFRP30047 84 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 TMEM241Q24JQ0 296 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 CFHR4Q92496 578 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 MISP3Q96FF7 219 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 FUT9Q9Y231 359 aa12.3□□□□□ -0.44
RPUSD3-215ENST00000475470 ACACBO00763 2458 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 PDE6DO43924 150 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 LGALS4P56470 323 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 SSX2Q16385 188 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 ETFRF1Q6IPR1 90 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 CYP2G1PQ6ZSU1 146 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 FCN1O00602 326 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 FOXH1O75593 365 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 MOSP00540 346 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 ATP5G3P48201 142 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 MEOX2P50222 304 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 MIR17HGQ75NE6 70 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 C19orf24Q9BVV8 132 aa12.29□□□□□ -0.44
RPUSD3-215ENST00000475470 TACC2O95359 2948 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 NBR2O15453 112 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 CNIH1O95406 144 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 CD24P25063 80 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 KIAA0141Q14154 515 aaPredicted RBP12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 HES1Q14469 280 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 RNF212Q495C1 297 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 CCDC144NLQ6NUI1 221 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 IGFBPL1Q8WX77 278 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 SRSF12Q8WXF0 261 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 NAV3Q8IVL0 2385 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 IGHV2-70DA0A0C4DH43 119 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 GOSR1O95249 250 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 IGHV4-39P01824 125 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 LMO4P61968 165 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 SSBP2P81877 361 aaPredicted RBP12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 ADIRFQ15847 76 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 OR1P1Q8NH06 330 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 TXNDC17Q9BRA2 123 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 SIRPDQ9H106 197 aa12.28□□□□□ -0.44
RPUSD3-215ENST00000475470 CXorf65A6NEN9 183 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 F6UZH7 168 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 CLN5O75503 358 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 TOX4O94842 621 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 S100A6P06703 90 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 RAB5AP20339 215 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 RND2P52198 227 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 MFAP2P55001 183 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 PAX2Q02962 417 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 PVRIGQ6DKI7 326 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 OR51G1Q8NGK1 321 aa12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 TECRQ9NZ01 308 aaKnown RBP12.27□□□□□ -0.44
RPUSD3-215ENST00000475470 IGSF10Q6WRI0 2623 aa12.27□□□□□ -0.45
RPUSD3-215ENST00000475470 TCRBV4S1A1TA0A5B7 111 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms