RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 TMEM187Q14656 261 aa13.02□□□□□ -0.33
PCGF3-209ENST00000475288 IDNKQ5T6J7 187 aa13.02□□□□□ -0.33
PCGF3-209ENST00000475288 GINS3Q9BRX5 216 aa13.02□□□□□ -0.33
PCGF3-209ENST00000475288 VSIRQ9H7M9 311 aa13.02□□□□□ -0.33
PCGF3-209ENST00000475288 APLNQ9ULZ1 77 aa13.02□□□□□ -0.33
PCGF3-209ENST00000475288 NSG2Q9Y328 171 aa13.02□□□□□ -0.33
PCGF3-209ENST00000475288 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.33
PCGF3-209ENST00000475288 KIAA1109Q2LD37 5005 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 LOC100506127A0A0U1RQW1 187 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 CCDC160A6NGH7 325 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 XRCC3O43542 346 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 CA1P00915 261 aaPredicted RBP13.01□□□□□ -0.33
PCGF3-209ENST00000475288 TFPI2P48307 235 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 MXD1Q05195 221 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 SLC25A46Q96AG3 418 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 ZNF2Q9BSG1 426 aaPredicted RBP13.01□□□□□ -0.33
PCGF3-209ENST00000475288 IFT46Q9NQC8 304 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 PKHD1P08F94 4074 aa13.01□□□□□ -0.33
PCGF3-209ENST00000475288 DBX1A6NMT0 343 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 GPR31O00270 319 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 YIF1AO95070 293 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 FCER2P06734 321 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 NAT1P18440 290 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 RFX2P48378 723 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 TAS2R46P59540 309 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 NCS1P62166 190 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 TCF24Q7RTU0 167 aa13□□□□□ -0.33
PCGF3-209ENST00000475288 IGHV3-49A0A0A0MS15 119 aa12.99□□□□□ -0.33
PCGF3-209ENST00000475288 MT-CO2P00403 227 aa12.99□□□□□ -0.33
PCGF3-209ENST00000475288 EIF4EP06730 217 aaKnown RBP12.99□□□□□ -0.33
PCGF3-209ENST00000475288 VBP1P61758 197 aa12.99□□□□□ -0.33
PCGF3-209ENST00000475288 Q8NAQ8 132 aa12.99□□□□□ -0.33
PCGF3-209ENST00000475288 FXYD6Q9H0Q3 95 aa12.99□□□□□ -0.33
PCGF3-209ENST00000475288 DNAH2Q9P225 4427 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 GNG7O60262 68 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 PRCDQ00LT1 54 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 SPCS2Q15005 226 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 LINC00336Q6ZUF6 198 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 GBGT1Q8N5D6 347 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 DUSP18Q8NEJ0 188 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 OR6F1Q8NGZ6 308 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 DYNC2LI1Q8TCX1 351 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 MISP3Q96FF7 219 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 S100A16Q96FQ6 103 aaKnown RBP12.98□□□□□ -0.33
PCGF3-209ENST00000475288 MS4A6AQ9H2W1 248 aa12.98□□□□□ -0.33
PCGF3-209ENST00000475288 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
PCGF3-209ENST00000475288 S100GP29377 79 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 DEFB131AP59861 70 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 TOMM20LQ6UXN7 152 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 CROCCP3Q8IVE0 287 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 OR5H2Q8NGV7 314 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 SEC22AQ96IW7 307 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 TMEM231Q9H6L2 316 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 RNF167Q9H6Y7 350 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 PTTG2Q9NZH5 202 aa12.97□□□□□ -0.33
PCGF3-209ENST00000475288 IGHV3OR16-13A0A075B7E8 117 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 IGHV3-74A0A0B4J1X5 117 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 IGLL5B9A064 214 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 DNASE2O00115 360 aaPredicted RBP12.96□□□□□ -0.33
PCGF3-209ENST00000475288 DEFB4AO15263 64 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 ST8SIA3O43173 380 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 MIFP14174 115 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 NPBWR1P48145 328 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 HSPE1P61604 102 aaKnown RBP12.96□□□□□ -0.33
PCGF3-209ENST00000475288 LSM3P62310 102 aaKnown RBP12.96□□□□□ -0.33
PCGF3-209ENST00000475288 ERHP84090 104 aaKnown RBP12.96□□□□□ -0.33
PCGF3-209ENST00000475288 LPCAT3Q6P1A2 487 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
PCGF3-209ENST00000475288 ZNF600Q6ZNG1 722 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 STHQ8IWL8 128 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 OR4A16Q8NH70 328 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.33
PCGF3-209ENST00000475288 DNAH17Q9UFH2 4485 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 ZNF705EA8MWA4 302 aaPredicted RBP12.95□□□□□ -0.34
PCGF3-209ENST00000475288 INS-IGF2F8WCM5 200 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 PMP2P02689 132 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 GIG44P09565 113 aaPredicted RBP12.95□□□□□ -0.34
PCGF3-209ENST00000475288 SPP1P10451 314 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 UBE2NLQ5JXB2 153 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 H2BFWTQ7Z2G1 175 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 LILRB2Q8N423 598 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
PCGF3-209ENST00000475288 APOHP02749 345 aaPredicted RBP12.94□□□□□ -0.34
PCGF3-209ENST00000475288 RBMY1A1P0DJD3 496 aaKnown RBP12.94□□□□□ -0.34
PCGF3-209ENST00000475288 RBMY1CP0DJD4 496 aa12.94□□□□□ -0.34
PCGF3-209ENST00000475288 TGFBR1P36897 503 aa12.94□□□□□ -0.34
PCGF3-209ENST00000475288 RPS19P39019 145 aaKnown RBP12.94□□□□□ -0.34
PCGF3-209ENST00000475288 RBMY1FQ15415 496 aaKnown RBP12.94□□□□□ -0.34
PCGF3-209ENST00000475288 TMEM69Q5SWH9 247 aa12.94□□□□□ -0.34
PCGF3-209ENST00000475288 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
PCGF3-209ENST00000475288 PVRIGQ6DKI7 326 aa12.94□□□□□ -0.34
PCGF3-209ENST00000475288 TRPT1Q86TN4 253 aaKnown RBP12.94□□□□□ -0.34
PCGF3-209ENST00000475288 PUS1Q9Y606 427 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCGF3-209ENST00000475288 RYR1P21817 5038 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms