RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 PRR20EP86478 221 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 PRR20CP86479 221 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 PRR20DP86480 221 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 PRR20BP86481 221 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 PRR20AP86496 221 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 MEF2BQ02080 365 aaPredicted RBP14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 HES1Q14469 280 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 ABHD5Q8WTS1 349 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 NAV3Q8IVL0 2385 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 MOSP00540 346 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 LINC00869P0C866 280 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 HABP2Q14520 560 aaPredicted RBP14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 DYNAPQ8N1N2 210 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 C17orf50Q8WW18 174 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 FAM168AQ92567 244 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 NIPSNAP3BQ9BS92 247 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 FNDC4Q9H6D8 234 aaPredicted RBP14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 MANBALQ9NQG1 85 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 MED13LQ71F56 2210 aa14.64□□□□□ -0.07
SEC61A2-213ENST00000475268 GATA2P23769 480 aaPredicted RBP14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 CD81P60033 236 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 CCDC144NLQ6NUI1 221 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 C19orf35Q6ZS72 473 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 SEPSECSQ9HD40 501 aaKnown RBP14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 NBR2O15453 112 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 FOXH1O75593 365 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 FAM90A2PQ658T7 463 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 SRSF12Q8WXF0 261 aaKnown RBP14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 MISP3Q96FF7 219 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 EAF1Q96JC9 268 aaPredicted RBP14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 TBX15Q96SF7 602 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 PIMREGQ9BSJ6 248 aa14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 UTP20O75691 2785 aaKnown RBP14.63□□□□□ -0.07
SEC61A2-213ENST00000475268 TEX22C9J3V5 150 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 PAGE4O60829 102 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 CNIH1O95406 144 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 ARL14EPLP0DKL9 152 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 ATF4P18848 351 aaPredicted RBP14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 ATP5J2P56134 94 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 RHOBP62745 196 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 SSBP2P81877 361 aaPredicted RBP14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 RHEBQ15382 184 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 FBLN7Q53RD9 439 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 MINOS1Q5TGZ0 78 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 SMCO4Q9NRQ5 59 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 MINOS1-NBL1R4GNA1 71 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 WNK2Q9Y3S1 2297 aa14.62□□□□□ -0.07
SEC61A2-213ENST00000475268 STAG3L2P0CL84 134 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 STAG3L3P0CL85 134 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 TAGLN2P37802 199 aaKnown RBP14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 SPATA31B1PQ5VZV4 182 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 EPG5Q9HCE0 2579 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 CXorf1O96002 111 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 MFAP2P55001 183 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 ZNF114Q8NC26 417 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 OR2T10Q8NGZ9 312 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 OR4F5Q8NH21 305 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 NPIPB3Q92617 1050 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 TVP23CQ96ET8 276 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 OR4F4Q96R69 305 aa14.61□□□□□ -0.07
SEC61A2-213ENST00000475268 OOSP1A8MZH6 123 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 UBE2E1P51965 193 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 TMEM249Q2WGJ8 235 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 FAM78BQ5VT40 261 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 SPNS3Q6ZMD2 512 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 NPBQ8NG41 125 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 UBE2G2P60604 165 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 C10orf105Q8TEF2 133 aa14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 MRPL36Q9P0J6 103 aaKnown RBP14.6□□□□□ -0.07
SEC61A2-213ENST00000475268 IGHV4-61A0A0C4DH41 118 aa14.59□□□□□ -0.07
SEC61A2-213ENST00000475268 CLEC2AQ6UVW9 174 aa14.59□□□□□ -0.07
SEC61A2-213ENST00000475268 CYP2G1PQ6ZSU1 146 aa14.59□□□□□ -0.07
SEC61A2-213ENST00000475268 OR1P1Q8NH06 330 aa14.59□□□□□ -0.07
SEC61A2-213ENST00000475268 SVEP1Q4LDE5 3571 aa14.59□□□□□ -0.07
SEC61A2-213ENST00000475268 C11orf94C9JXX5 98 aa14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 NDUFA3O95167 84 aa14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 RND2P52198 227 aa14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 CST9LP1Q5W188 147 aa14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 PVRIGQ6DKI7 326 aa14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 ETFRF1Q6IPR1 90 aa14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 SLC25A33Q9BSK2 321 aa14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 TBL2Q9Y4P3 447 aaKnown RBP14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 F11RQ9Y624 299 aaKnown RBP14.58□□□□□ -0.07
SEC61A2-213ENST00000475268 ZNF727A8MUV8 499 aa14.58□□□□□ -0.08
SEC61A2-213ENST00000475268 SRSF1Q07955 248 aaKnown RBP eCLIP14.58□□□□□ -0.08
SEC61A2-213ENST00000475268 ZNF674Q2M3X9 581 aa14.58□□□□□ -0.08
SEC61A2-213ENST00000475268 MIR17HGQ75NE6 70 aa14.58□□□□□ -0.08
SEC61A2-213ENST00000475268 NRGNQ92686 78 aa14.58□□□□□ -0.08
SEC61A2-213ENST00000475268 PERPQ96FX8 193 aa14.58□□□□□ -0.08
SEC61A2-213ENST00000475268 IGHV3-21A0A0B4J1V1 117 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 A1L4Q6 167 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 NCBP2LA6PVI3 153 aaKnown RBP14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 C5orf64Q2M2E5 130 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 NANPQ8TBE9 248 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 ISOC2Q96AB3 205 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 RPUSD4Q96CM3 377 aaKnown RBP14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 FUT9Q9Y231 359 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 TMEM250H0YL14 139 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 NDUFS8O00217 210 aa14.57□□□□□ -0.08
SEC61A2-213ENST00000475268 MT-CO2P00403 227 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms