RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 KLF9Q13886 244 aaPredicted RBP10.31□□□□□ -0.76
CCDC78-209ENST00000474647 Q56UQ5 140 aa10.31□□□□□ -0.76
CCDC78-209ENST00000474647 TRIQKQ629K1 86 aa10.31□□□□□ -0.76
CCDC78-209ENST00000474647 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
CCDC78-209ENST00000474647 DEDD2Q8WXF8 326 aa10.31□□□□□ -0.76
CCDC78-209ENST00000474647 RARRES2Q99969 163 aa10.31□□□□□ -0.76
CCDC78-209ENST00000474647 SRSF8Q9BRL6 282 aaKnown RBP10.31□□□□□ -0.76
CCDC78-209ENST00000474647 CHRDL1Q9BU40 450 aa10.31□□□□□ -0.76
CCDC78-209ENST00000474647 HINT2Q9BX68 163 aa10.31□□□□□ -0.76
CCDC78-209ENST00000474647 IGKV3-7A0A075B6H7 116 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 RBFOX2O43251 390 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC78-209ENST00000474647 PMP2P02689 132 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 IFNA4P05014 189 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 SERPINE2P07093 398 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 AKAIN1P0CW23 69 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 AP3S2P59780 193 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 WT1-ASQ06250 92 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 RNASE10Q5GAN6 216 aaKnown RBP10.3□□□□□ -0.76
CCDC78-209ENST00000474647 AADACL3Q5VUY0 350 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 STEAP1BQ6NZ63 245 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 SPSB3Q6PJ21 355 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 TMEM17Q86X19 198 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 TOMM5Q8N4H5 51 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 MFFQ9GZY8 342 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 CSTL1Q9H114 145 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 C21orf62Q9NYP8 219 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 EHFQ9NZC4 300 aa10.3□□□□□ -0.76
CCDC78-209ENST00000474647 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 MPTX1A8MV57 137 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 M0QYG6 137 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 DEFB4AO15263 64 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 TRAPPC2P0DI81 140 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 TRAPPC2BP0DI82 140 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 RFX2P48378 723 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 ERVK-16P61578 105 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 PRR20EP86478 221 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 PRR20CP86479 221 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 PRR20DP86480 221 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 PRR20BP86481 221 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 PRR20AP86496 221 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 MEF2DQ14814 521 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 MSMO1Q15800 293 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 POU2AF1Q16633 256 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 THOC7Q6I9Y2 204 aaKnown RBP10.29□□□□□ -0.76
CCDC78-209ENST00000474647 ZNF818PQ6ZRF7 136 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 ARRDC1Q8N5I2 433 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 ZBTB34Q8NCN2 500 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 OR4D10Q8NGI6 311 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 OR4C16Q8NGL9 310 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 OR11H2Q8NH07 326 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 SCARB1Q8WTV0 552 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 GATAD1Q8WUU5 269 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 RNF2Q99496 336 aa10.29□□□□□ -0.76
CCDC78-209ENST00000474647 TEX50A0A1B0GTY4 177 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 A0A1B0GVG6 124 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 C15orf62A8K5M9 175 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 RAB3DO95716 219 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 INPP1P49441 399 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 MFAP2P55001 183 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 HSD17B13Q7Z5P4 300 aaPredicted RBP10.28□□□□□ -0.76
CCDC78-209ENST00000474647 OR1L8Q8NGR8 309 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 C2CD4CQ8TF44 421 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 GIMAP1Q8WWP7 306 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 C11orf68Q9H3H3 251 aaKnown RBP10.28□□□□□ -0.76
CCDC78-209ENST00000474647 PLEKHA2Q9HB19 425 aa10.28□□□□□ -0.76
CCDC78-209ENST00000474647 F11RQ9Y624 299 aaKnown RBP10.28□□□□□ -0.76
CCDC78-209ENST00000474647 MARCH11A6NNE9 402 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 F8W735 103 aaPredicted RBP10.27□□□□□ -0.77
CCDC78-209ENST00000474647 K7EMT4 169 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 UPK1BO75841 260 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 YIF1AO95070 293 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 CA1P00915 261 aaPredicted RBP10.27□□□□□ -0.77
CCDC78-209ENST00000474647 ADMP35318 185 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 FAUP35544 74 aaKnown RBP10.27□□□□□ -0.77
CCDC78-209ENST00000474647 HERV-K104P61576 105 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 FAAP20Q6NZ36 180 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 DHRS11Q6UWP2 260 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 GBGT1Q8N5D6 347 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 TMEM116Q8NCL8 245 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 LSM10Q969L4 123 aaKnown RBP10.27□□□□□ -0.77
CCDC78-209ENST00000474647 ZNF2Q9BSG1 426 aaPredicted RBP10.27□□□□□ -0.77
CCDC78-209ENST00000474647 FXYD6Q9H0Q3 95 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 COMMD9Q9P000 198 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 SMPXQ9UHP9 88 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 NSG2Q9Y328 171 aa10.27□□□□□ -0.77
CCDC78-209ENST00000474647 IGHV3OR16-13A0A075B7E8 117 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 IGHV3-74A0A0B4J1X5 117 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 IGHV7-4-1A0A0J9YVY3 117 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 DISC1C4P0D8 188 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 CHEK1O14757 476 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 RLN1P04808 185 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 TSPAN5P62079 268 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 RELQ04864 619 aaPredicted RBP10.26□□□□□ -0.77
CCDC78-209ENST00000474647 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 OR6F1Q8NGZ6 308 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 BORCS5Q969J3 196 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 MOB3AQ96BX8 217 aa10.26□□□□□ -0.77
CCDC78-209ENST00000474647 C7orf50Q9BRJ6 194 aaKnown RBP10.26□□□□□ -0.77
CCDC78-209ENST00000474647 RHPN1-AS1Q9BWJ2 59 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms