RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 IGHV3-23P01764 117 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 HSPB1P04792 205 aaKnown RBP12.13□□□□□ -0.47
COL1A1-204ENST00000474644 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 IAH1Q2TAA2 248 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-204ENST00000474644 PVRIGQ6DKI7 326 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 SLC24A4Q8NFF2 622 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 VN1R17PQ8TDU5 208 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 DPF1Q92782 380 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 MISP3Q96FF7 219 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 CXorf58Q96LI9 332 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
COL1A1-204ENST00000474644 RANGRFQ9HD47 186 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-204ENST00000474644 PEF1Q9UBV8 284 aaKnown RBP12.13□□□□□ -0.47
COL1A1-204ENST00000474644 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 HTR2BP41595 481 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 SUB1P53999 127 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL1A1-204ENST00000474644 SLURP1P55000 103 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 RGS21Q2M5E4 152 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 ZBTB8BQ8NAP8 495 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-204ENST00000474644 WFDC9Q8NEX5 89 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 ZNF502Q8TBZ5 544 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 MAGT1Q9H0U3 335 aa12.12□□□□□ -0.47
COL1A1-204ENST00000474644 TRBV7-1A0A0A6YYK4 115 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 I3L2K1 104 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 BMPR1BO00238 502 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 CD33P20138 364 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 HOXD3P31249 432 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-204ENST00000474644 C2orf83Q53S99 150 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 FAM209BQ5JX69 171 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 SCARB1Q8WTV0 552 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
COL1A1-204ENST00000474644 MEGF8Q7Z7M0 2845 aa12.11□□□□□ -0.47
COL1A1-204ENST00000474644 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 CORTO00230 105 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 SYNGR2O43760 224 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 MED6O75586 246 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 MT-CO2P00403 227 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 IAPPP10997 89 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 NPY1RP25929 384 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 NKX2-1P43699 371 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-204ENST00000474644 ID3Q02535 119 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 TATDN3Q17R31 274 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 CLEC19AQ6UXS0 136 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 C21orf62Q9NYP8 219 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 GSKIPQ9P0R6 139 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
COL1A1-204ENST00000474644 C5orf51A6NDU8 294 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 F8W735 103 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-204ENST00000474644 SCGB1D2O95969 90 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 IFNA10P01566 189 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 ZP3P21754 424 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 GPR183P32249 361 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 ARL3P36405 182 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 POLR2GP62487 172 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL1A1-204ENST00000474644 DCUN1D4Q92564 292 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 DLX4Q92988 240 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-204ENST00000474644 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-204ENST00000474644 U3KQ87 197 aa12.09□□□□□ -0.47
COL1A1-204ENST00000474644 GOSR2O14653 212 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 SSNA1O43805 119 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 SSSCA1O60232 199 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 CLEC3BP05452 202 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 RPEL1Q2QD12 228 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 GSG1LQ6UXU4 331 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 RCC1LQ96I51 464 aaKnown RBP12.08□□□□□ -0.48
COL1A1-204ENST00000474644 ATP6V0BQ99437 205 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-204ENST00000474644 ZC4H2Q9NQZ6 224 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 ALG5Q9Y673 324 aa12.08□□□□□ -0.48
COL1A1-204ENST00000474644 OR2T8A6NH00 312 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 C15orf62A8K5M9 175 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 WRBO00258 174 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 TGOLN2O43493 480 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 GGCTO75223 188 aaKnown RBP12.07□□□□□ -0.48
COL1A1-204ENST00000474644 MBPP02686 304 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-204ENST00000474644 IGLL1P15814 213 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 FCGR2BP31994 310 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-204ENST00000474644 OPRK1P41145 380 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 OXA1LQ15070 435 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 Q56UQ5 140 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 NOXA1Q86UR1 476 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
COL1A1-204ENST00000474644 C2orf50Q96LR7 162 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
COL1A1-204ENST00000474644 RCL1Q9Y2P8 373 aaKnown RBP12.07□□□□□ -0.48
COL1A1-204ENST00000474644 H3BP45 60 aa12.06□□□□□ -0.48
COL1A1-204ENST00000474644 OVOL1O14753 267 aa12.06□□□□□ -0.48
COL1A1-204ENST00000474644 SIX6O95475 246 aa12.06□□□□□ -0.48
COL1A1-204ENST00000474644 LY86O95711 162 aa12.06□□□□□ -0.48
COL1A1-204ENST00000474644 TMEM50AO95807 157 aa12.06□□□□□ -0.48
COL1A1-204ENST00000474644 MFAP4P55083 255 aa12.06□□□□□ -0.48
COL1A1-204ENST00000474644 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-204ENST00000474644 IL15RAQ13261 267 aa12.06□□□□□ -0.48
COL1A1-204ENST00000474644 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-204ENST00000474644 C1QL4Q86Z23 238 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms