RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 TMEM89A2RUT3 159 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 PSMB11A5LHX3 300 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 SH2D7A6NKC9 451 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-206ENST00000474564 MYO9AB2RTY4 2548 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 TEX22C9J3V5 150 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 FBXO24O75426 580 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 REG1AP05451 166 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 AREGP15514 252 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 CTRB1P17538 263 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 GPX4P36969 197 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-206ENST00000474564 OPRK1P41145 380 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 CRIP2P52943 208 aaPredicted RBP8.16□□□□□ -1.1
COL12A1-206ENST00000474564 PAX9P55771 341 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 WT1-ASQ06250 92 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 FBLN7Q53RD9 439 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 CTRB2Q6GPI1 263 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 TEX38Q6PEX7 206 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 Q8N2B8 174 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 HSD17B11Q8NBQ5 300 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 STOML3Q8TAV4 291 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 CXorf58Q96LI9 332 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 P2RX4Q99571 388 aa8.16□□□□□ -1.1
COL12A1-206ENST00000474564 HIVEP2P31629 2446 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 UBE2L5PA0A1B0GUS4 154 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 FAM223BA6NKX1 122 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 E7EUB6 86 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 NDUFA7O95182 113 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 PRH1P02810 166 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 TRGV3P03979 118 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 FABP1P07148 127 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 RNASE2P10153 161 aaKnown RBP8.15□□□□□ -1.1
COL12A1-206ENST00000474564 PF4V1P10720 104 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 ATP5G2Q06055 141 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 TMEM14EPQ6UXP3 125 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 FAM223AQ8IWN6 122 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 ZNF709Q8N972 641 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 NECAP1Q8NC96 275 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 OR4X2Q8NGF9 303 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 LRRC20Q8TCA0 184 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 USMG5Q96IX5 58 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 TMEM147Q9BVK8 224 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 C16orf95Q9H693 158 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 ZNF702PQ9H963 129 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 ESM1Q9NQ30 184 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 PFDN2Q9UHV9 154 aa8.15□□□□□ -1.1
COL12A1-206ENST00000474564 FLNBO75369 2602 aaKnown RBP8.14□□□□□ -1.11
COL12A1-206ENST00000474564 TRAV30A0A087WSZ9 112 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 CGB1A6NKQ9 187 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 C15orf62A8K5M9 175 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 FNDC10F2Z333 226 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 G3V318 75 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 BRI3O95415 125 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 CFDP00746 253 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-206ENST00000474564 ELANEP08246 267 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 EGR2P11161 476 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-206ENST00000474564 NPBWR1P48145 328 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 TPPP2P59282 170 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 DLK1P80370 383 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 AKR1C1Q04828 323 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 BSXQ3C1V8 233 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 ACSM6Q6P461 480 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 UBAC2Q8NBM4 344 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 GNPNAT1Q96EK6 184 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-206ENST00000474564 OR4C12Q96R67 309 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 C11orf1Q9H5F2 150 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 NPVFQ9HCQ7 196 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 FBXL7Q9UJT9 491 aa8.14□□□□□ -1.11
COL12A1-206ENST00000474564 TRBV7-1A0A0A6YYK4 115 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 LINC01548A6NM66 108 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 C17orf112F2Z3M2 114 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 MPDU1O75352 247 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 TMEM50AO95807 157 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 FGF7P21781 194 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 MFAP4P55083 255 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 SSBP2P81877 361 aaPredicted RBP8.13□□□□□ -1.11
COL12A1-206ENST00000474564 RHOGP84095 191 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 NDPQ00604 133 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 CD69Q07108 199 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 FOXL1Q12952 345 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 FOXE3Q13461 319 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 AKR1C8PQ5T2L2 129 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 Q6ZSV7 163 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 OR2G3Q8NGZ4 309 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 VN1R17PQ8TDU5 208 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 RNF141Q8WVD5 230 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 EEF1AKMT3Q96AZ1 226 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 BSCL2Q96G97 398 aaPredicted RBP8.13□□□□□ -1.11
COL12A1-206ENST00000474564 NOL4LQ96MY1 436 aaPredicted RBP8.13□□□□□ -1.11
COL12A1-206ENST00000474564 MS4A10Q96PG2 267 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 TXN2Q99757 166 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 SLC25A32Q9H2D1 315 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 KCNIP2Q9NS61 270 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 LINC00527Q9UJ94 153 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 FBXO7Q9Y3I1 522 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 CSMD2Q7Z408 3487 aa8.13□□□□□ -1.11
COL12A1-206ENST00000474564 FLNAP21333 2647 aaKnown RBP8.13□□□□□ -1.11
COL12A1-206ENST00000474564 NAV3Q8IVL0 2385 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms