RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, human

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFCD-204	ENST00000474543	SNURFL	B1AK76	121 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543		F2Z2F3	143 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543		M0R1B8	84 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	PLA2G2A	P14555	144 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	RAB4A	P20338	218 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	GNG4	P50150	75 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	KLF3	P57682	345 aa	Predicted RBP	11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	RAN	P62826	216 aa	Known RBP	11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543		Q0VG73	95 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	TPTE2P1	Q5T6R2	138 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	OR8I2	Q8N0Y5	310 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	ST6GALNAC3	Q8NDV1	305 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	FAM222B	Q8WU58	562 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	ZNF503	Q96F45	646 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	TMEM167B	Q9NRX6	74 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	IL19	Q9UHD0	177 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	PRND	Q9UKY0	176 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	UPK2	O00526	184 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	OR10J4	P0C629	311 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	GLRX	P35754	106 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	PRCD	Q00LT1	54 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	TDRG1	Q3Y452	100 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	VHLL	Q6RSH7	139 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	TOMM20L	Q6UXN7	152 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	PQLC2	Q6ZP29	291 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	BAGE3	Q86Y29	109 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	BAGE2	Q86Y30	109 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	HSPB9	Q9BQS6	159 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	GNB1L	Q9BYB4	327 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	PLEKHA3	Q9HB20	300 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	TECR	Q9NZ01	308 aa	Known RBP	11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	ZNF257	Q9Y2Q1	563 aa		11.76	□□□□□ -0.53
NELFCD-204	ENST00000474543	POLE	Q07864	2286 aa		11.75	□□□□□ -0.53
NELFCD-204	ENST00000474543	TRBV9	A0A0B4J1U6	114 aa		11.75	□□□□□ -0.53
NELFCD-204	ENST00000474543	GNLY	P22749	145 aa		11.75	□□□□□ -0.53
NELFCD-204	ENST00000474543	GATA2	P23769	480 aa	Predicted RBP	11.75	□□□□□ -0.53
NELFCD-204	ENST00000474543	GNG10	P50151	68 aa		11.75	□□□□□ -0.53
NELFCD-204	ENST00000474543	TEX43	Q6ZNM6	134 aa		11.75	□□□□□ -0.53
NELFCD-204	ENST00000474543	DOLPP1	Q86YN1	238 aa		11.75	□□□□□ -0.53
NELFCD-204	ENST00000474543	TEX50	A0A1B0GTY4	177 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	SRRM4	A7MD48	611 aa	Known RBP	11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	MMP23A	O75900	390 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	CT45A6	P0DMU7	189 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	CT45A5	P0DMU8	189 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	CT45A7	P0DMV0	189 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	CDKN1A	P38936	164 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	RBPJ	Q06330	500 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	OR5AU1	Q8NGC0	362 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	SLC35E1	Q96K37	410 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	RNASE7	Q9H1E1	156 aa	Known RBP	11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	RNF7	Q9UBF6	113 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	FASN	P49327	2511 aa	Known RBP	11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	IGLV3-9	A0A075B6K5	115 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	MBD3L3	A6NE82	208 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543		J3QKU1	62 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	IGKV1-16	P04430	117 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	GATA4	P43694	442 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	UQCRFS1	P47985	274 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	CX3CL1	P78423	397 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	ZNF124	Q15973	351 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	STUM	Q69YW2	141 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	OSTC	Q9NRP0	149 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	RELN	P78509	3460 aa		11.74	□□□□□ -0.53
NELFCD-204	ENST00000474543	GGTLC3	B5MD39	225 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	OR7C2	O60412	319 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	OR5G3	P0C626	314 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	MLANA	Q16655	118 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	C2orf83	Q53S99	150 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	TIMM23B	Q5SRD1	257 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	DEFB108B	Q8NET1	73 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	GAFA1	Q96PS6	74 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	C20orf144	Q9BQM9	153 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	LINC00574	Q9H8X3	128 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	GNB4	Q9HAV0	340 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	GCM1	Q9NP62	436 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	SLC35D1	Q9NTN3	355 aa		11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	HELZ2	Q9BYK8	2649 aa	Known RBP	11.73	□□□□□ -0.53
NELFCD-204	ENST00000474543	SPINK4	O60575	86 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	IGLV2-8	P01709	118 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	TIGIT	Q495A1	244 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	SLC25A48	Q6ZT89	311 aa	Known RBP	11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	PNKD	Q8N490	385 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	CCL13	Q99616	98 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	SAMD10	Q9BYL1	202 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	ZNRD1	Q9P1U0	126 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	PLCE1	Q9P212	2302 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	RNASE2	P10153	161 aa	Known RBP	11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	SUMO1	P63165	101 aa	Known RBP	11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	FXYD3	Q14802	87 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	RTL8B	Q17RB0	113 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	TMEM136	Q6ZRR5	245 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	OR9G1	Q8NH87	305 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	VN1R17P	Q8TDU5	208 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	C19orf24	Q9BVV8	132 aa		11.72	□□□□□ -0.53
NELFCD-204	ENST00000474543	NAT8B	Q9UHF3	227 aa		11.72	□□□□□ -0.53

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