RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 HIGD1AQ9Y241 93 aa6□□□□□ -1.45
GPNMB-209ENST00000474157 OR1A2Q9Y585 309 aa6□□□□□ -1.45
GPNMB-209ENST00000474157 WNT6Q9Y6F9 365 aa6□□□□□ -1.45
GPNMB-209ENST00000474157 V9GYY9 64 aa6□□□□□ -1.45
GPNMB-209ENST00000474157 LAMA1P25391 3075 aa6□□□□□ -1.45
GPNMB-209ENST00000474157 ANAPC1Q9H1A4 1944 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 CACNA1EQ15878 2313 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 MYO9AB2RTY4 2548 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 SMIM28A0A1B0GU29 152 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 GRIFINA4D1Z8 144 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 C2orf70A6NJV1 201 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 FOXI3A8MTJ6 420 aaPredicted RBP5.99□□□□□ -1.45
GPNMB-209ENST00000474157 GGTLC3B5MD39 225 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ZG16O60844 167 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 APOMO95445 188 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 IGHV3-7P01780 117 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ATP5G1P05496 136 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 CSN3P07498 182 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 H2BFMP0C1H6 154 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 GLRXP35754 106 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 VDAC2P45880 294 aaPredicted RBP5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ATP5G3P48201 142 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 DAP3P51398 398 aaKnown RBP5.99□□□□□ -1.45
GPNMB-209ENST00000474157 SGSHP51688 502 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 EFNB2P52799 333 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ATP5G2Q06055 141 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 TAF10Q12962 218 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 KIAA1644Q3SXP7 199 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 TMEM196Q5HYL7 178 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 C6orf226Q5I0X4 101 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 MS4A13Q5J8X5 152 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 TSPO2Q5TGU0 170 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 TEX36Q5VZQ5 186 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ZNF550Q7Z398 422 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 FAM19A5Q7Z5A7 132 aaPredicted RBP5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ZNF645Q8N7E2 425 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 TMEM178AQ8NBL3 297 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 OR10G7Q8NGN6 311 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 SCAMP5Q8TAC9 235 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 LINC00476Q8WZB0 136 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 TMEM101Q96IK0 257 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 PRR25Q96S07 402 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 MCHR1Q99705 422 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 PRADC1Q9BSG0 188 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ELOVL3Q9HB03 270 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 HIGD1BQ9P298 99 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 ARL2-SNX15V9GYD0 113 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 TEP1Q99973 2627 aaKnown RBP5.99□□□□□ -1.45
GPNMB-209ENST00000474157 NOTCH4Q99466 2003 aa5.99□□□□□ -1.45
GPNMB-209ENST00000474157 CFAP46Q8IYW2 2715 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 E9PLD3 99 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 C11orf98E9PRG8 122 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 FAM72CH0Y354 149 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 TIMM8AO60220 97 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 SNCGO76070 127 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 CD59P13987 128 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 GATA2P23769 480 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 ZNF133P52736 654 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 HSPE1P61604 102 aaKnown RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 RAE1P78406 368 aaKnown RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 EIF3IQ13347 325 aaKnown RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 IL11RAQ14626 422 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 POM121L1PQ3SYA9 428 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 Q56UQ5 140 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 FAM72AQ5TYM5 149 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 LYRM7Q5U5X0 104 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 TMEM211Q6ICI0 200 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 FAM72DQ6L9T8 149 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 AMTNQ6UX39 209 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 FAM72BQ86X60 149 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 TMEM252Q8N6L7 170 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 LMX1AQ8TE12 382 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 WIPF2Q8TF74 440 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 UBE2E3Q969T4 207 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 C8orf44Q96CB5 159 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 FLYWCH2Q96CP2 140 aaKnown RBP5.98□□□□□ -1.45
GPNMB-209ENST00000474157 C18orf12Q96KH6 178 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 OR2H1Q9GZK4 316 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 SAP30LQ9HAJ7 183 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 NOTCH2Q04721 2471 aa5.98□□□□□ -1.45
GPNMB-209ENST00000474157 ANKRD17O75179 2603 aaKnown RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 TEX15Q9BXT5 2789 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 KIF26AQ9ULI4 1882 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 A0A1B0GV50 99 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 HMGN4O00479 90 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 CLDN5O00501 218 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 SPRY2O43597 315 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 GP1BBP13224 206 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 IGFBP3P17936 291 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 BLVRBP30043 206 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 SUMO2P61956 95 aaKnown RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 RPL31P62899 125 aaKnown RBP5.97□□□□□ -1.45
GPNMB-209ENST00000474157 PSG4Q00888 419 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 TAL2Q16559 108 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 CEACAM16Q2WEN9 425 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 PCSK4Q6UW60 755 aa5.97□□□□□ -1.45
GPNMB-209ENST00000474157 ZDHHC23Q8IYP9 409 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms