RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
DDX56-209ENST00000473924 SEC22CQ9BRL7 303 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 HSPB7Q9UBY9 170 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 MGAM2Q2M2H8 2515 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 G3V4G9 280 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 RNASE2P10153 161 aaKnown RBP9.55□□□□□ -0.88
DDX56-209ENST00000473924 ARL3P36405 182 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 HTR2BP41595 481 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 TATDN3Q17R31 274 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 C1QL4Q86Z23 238 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 DTD1Q8TEA8 209 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 CCDC140Q96MF4 163 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 GPR61Q9BZJ8 451 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 RBKSQ9H477 322 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 GPN1Q9HCN4 374 aaPredicted RBP9.55□□□□□ -0.88
DDX56-209ENST00000473924 C21orf62Q9NYP8 219 aa9.55□□□□□ -0.88
DDX56-209ENST00000473924 SEC14L6B5MCN3 397 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 FAM90A26D6RGX4 464 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 INMT-MINDY4F8WBC2 141 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 CORTO00230 105 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 BMPR1BO00238 502 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 GGCTO75223 188 aaKnown RBP9.54□□□□□ -0.88
DDX56-209ENST00000473924 PITX3O75364 302 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 MED6O75586 246 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 MT-CO2P00403 227 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 IFNA10P01566 189 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 CLEC3BP05452 202 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 GPR183P32249 361 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 Q56UQ5 140 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 C12orf45Q8N5I9 185 aaPredicted RBP9.54□□□□□ -0.88
DDX56-209ENST00000473924 UBAC2Q8NBM4 344 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 SLC24A4Q8NFF2 622 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 SCARB1Q8WTV0 552 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 ZC4H2Q9NQZ6 224 aa9.54□□□□□ -0.88
DDX56-209ENST00000473924 MPTX1A8MV57 137 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 K7EIM0 57 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 PRAF2O60831 178 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 OR2C1O95371 312 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 IL5P05113 134 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 SYNJ2BPP57105 145 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 IAH1Q2TAA2 248 aaPredicted RBP9.53□□□□□ -0.88
DDX56-209ENST00000473924 C9orf66Q5T8R8 295 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 NOXA1Q86UR1 476 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 ELOVL1Q9BW60 279 aa9.53□□□□□ -0.88
DDX56-209ENST00000473924 GAR1Q9NY12 217 aaKnown RBP9.53□□□□□ -0.88
DDX56-209ENST00000473924 C5orf51A6NDU8 294 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 OR2T8A6NH00 312 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 FAM25EA8MYX2 175 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 I3L2K1 104 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 WRBO00258 174 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 SAP30O75446 220 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 IGHV3-48P01763 117 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 IAPPP10997 89 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 NPY1RP25929 384 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 OPRK1P41145 380 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 MFAP4P55083 255 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 KLF5Q13887 457 aaPredicted RBP9.52□□□□□ -0.89
DDX56-209ENST00000473924 BSXQ3C1V8 233 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 C2orf83Q53S99 150 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 ACSM6Q6P461 480 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 BSCL2Q96G97 398 aaPredicted RBP9.52□□□□□ -0.89
DDX56-209ENST00000473924 CIB3Q96Q77 187 aaPredicted RBP9.52□□□□□ -0.89
DDX56-209ENST00000473924 OR4C12Q96R67 309 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 MARVELD1Q9BSK0 173 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 GSKIPQ9P0R6 139 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 U3KQ87 197 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 NBEAL1Q6ZS30 2694 aa9.52□□□□□ -0.89
DDX56-209ENST00000473924 RPS10-NUDT3A0A1W2PQS6 291 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 CCSO14618 274 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 TGOLN2O43493 480 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 SYNGR2O43760 224 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 GNG7O60262 68 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 SCGB1D2O95969 90 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
DDX56-209ENST00000473924 FAM106AQ4KMX7 169 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 C11orf87Q6NUJ2 197 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 SPSB3Q6PJ21 355 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 OR9G4Q8NGQ1 327 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 OR10C1Q96KK4 312 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 TXN2Q99757 166 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 PALMDQ9NP74 551 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 PEMTQ9UBM1 199 aa9.51□□□□□ -0.89
DDX56-209ENST00000473924 PAIP2BQ9ULR5 123 aaKnown RBP9.51□□□□□ -0.89
DDX56-209ENST00000473924 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 ZNF320A2RRD8 509 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 SNRPGP15A8MWD9 76 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 NUPL2O15504 423 aaKnown RBP9.5□□□□□ -0.89
DDX56-209ENST00000473924 PTTG1O95997 202 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 IFNA4P05014 189 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 NPBWR1P48145 328 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 INSL3P51460 131 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 ATP5IP56385 69 aaPredicted RBP9.5□□□□□ -0.89
DDX56-209ENST00000473924 RAB11AP62491 216 aa9.5□□□□□ -0.89
DDX56-209ENST00000473924 RPP30P78346 268 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms