RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ST8SIA3O43173 380 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 ADAP1O75689 374 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 SCAF4O95104 1147 aaKnown RBP10.07□□□□□ -0.8
TPM3-216ENST00000473036 IFNA17P01571 189 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 GIPP09681 153 aaPredicted RBP10.07□□□□□ -0.8
TPM3-216ENST00000473036 PVALBP20472 110 aaPredicted RBP10.07□□□□□ -0.8
TPM3-216ENST00000473036 BCAP31P51572 246 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 KRTAP10-11P60412 298 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 RPP30P78346 268 aaKnown RBP10.07□□□□□ -0.8
TPM3-216ENST00000473036 ZNF616Q08AN1 781 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 SPINK9Q5DT21 86 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 NOXA1Q86UR1 476 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 ZBTB8BQ8NAP8 495 aaPredicted RBP10.07□□□□□ -0.8
TPM3-216ENST00000473036 DCUN1D4Q92564 292 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 DLX4Q92988 240 aaPredicted RBP10.07□□□□□ -0.8
TPM3-216ENST00000473036 HINT2Q9BX68 163 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 ZNF436Q9C0F3 470 aaPredicted RBP10.07□□□□□ -0.8
TPM3-216ENST00000473036 ENY2Q9NPA8 101 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 GSKIPQ9P0R6 139 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 CACNG5Q9UF02 275 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 S4R3C0 116 aa10.07□□□□□ -0.8
TPM3-216ENST00000473036 LINC01619G3V211 115 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 WRBO00258 174 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 CYB5BO43169 146 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 PITX3O75364 302 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 IGHV3-23P01764 117 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 PRB2P02812 416 aaPredicted RBP10.06□□□□□ -0.8
TPM3-216ENST00000473036 HSPB1P04792 205 aaKnown RBP10.06□□□□□ -0.8
TPM3-216ENST00000473036 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 NKX2-1P43699 371 aaPredicted RBP10.06□□□□□ -0.8
TPM3-216ENST00000473036 FCN2Q15485 313 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 C15orf32Q32M92 178 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 C11orf87Q6NUJ2 197 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 USMG5Q96IX5 58 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 HIPK2Q9H2X6 1198 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 AURKAIP1Q9NWT8 199 aaPredicted RBP10.06□□□□□ -0.8
TPM3-216ENST00000473036 DNAH7Q8WXX0 4024 aa10.06□□□□□ -0.8
TPM3-216ENST00000473036 MFSD2BA6NFX1 497 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 FAM223BA6NKX1 122 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
TPM3-216ENST00000473036 ERHP84090 104 aaKnown RBP10.05□□□□□ -0.8
TPM3-216ENST00000473036 PRCDQ00LT1 54 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 ID3Q02535 119 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
TPM3-216ENST00000473036 AKAP14Q86UN6 197 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 FAM223AQ8IWN6 122 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 NECAP1Q8NC96 275 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 OR1L6Q8NGR2 347 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 RCC1LQ96I51 464 aaKnown RBP10.05□□□□□ -0.8
TPM3-216ENST00000473036 OR10C1Q96KK4 312 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 CCDC140Q96MF4 163 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 RAB40CQ96S21 281 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 HSPB7Q9UBY9 170 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 FBXL7Q9UJT9 491 aa10.05□□□□□ -0.8
TPM3-216ENST00000473036 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.04□□□□□ -0.8
TPM3-216ENST00000473036 A0A0G2JLM5 398 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 PPP5D1E7EU14 171 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 BMPR1BO00238 502 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 CCNKO75909 580 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 SUB1P53999 127 aaKnown RBP eCLIP10.04□□□□□ -0.8
TPM3-216ENST00000473036 TAS2R30P59541 319 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 ATP5G2Q06055 141 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 TNFRSF9Q07011 255 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 OR2C3Q8N628 320 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 OR11H7Q8NGC8 314 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 OR4D5Q8NGN0 318 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 ZNF414Q96IQ9 312 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 PLEKHA3Q9HB20 300 aa10.04□□□□□ -0.8
TPM3-216ENST00000473036 PEF1Q9UBV8 284 aaKnown RBP10.04□□□□□ -0.8
TPM3-216ENST00000473036 F11RQ9Y624 299 aaKnown RBP10.04□□□□□ -0.8
TPM3-216ENST00000473036 IGHV3-21A0A0B4J1V1 117 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 CEBPZOSA8MTT3 80 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
TPM3-216ENST00000473036 L7N2F9 121 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 CCSO14618 274 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 SYNGR2O43760 224 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 SNCAP37840 140 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 H2BFSP57053 126 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 VAMP2P63027 116 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 KLF5Q13887 457 aaPredicted RBP10.03□□□□□ -0.8
TPM3-216ENST00000473036 IL34Q6ZMJ4 242 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 THAP6Q8TBB0 222 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 DPF1Q92782 380 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 RANGRFQ9HD47 186 aaPredicted RBP10.03□□□□□ -0.8
TPM3-216ENST00000473036 U3KQ87 197 aa10.03□□□□□ -0.8
TPM3-216ENST00000473036 hCG_2014768A0A024R1R8 64 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 K7EIM0 57 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 PFDN1O60925 122 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 DEFA4P12838 97 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 CXCL3P19876 107 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 EDN2P20800 178 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 NUP62P37198 522 aaPredicted RBP10.02□□□□□ -0.81
TPM3-216ENST00000473036 HTR2BP41595 481 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 EGFEM1PQ0D2K5 195 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 IL15RAQ13261 267 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 ZNF114Q8NC26 417 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 PPP1R1CQ8WVI7 109 aa10.02□□□□□ -0.81
TPM3-216ENST00000473036 HEYLQ9NQ87 328 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms