RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 DLX4Q92988 240 aaPredicted RBP15.98■□□□□ 0.15
TOP3A-204ENST00000472959 MISP3Q96FF7 219 aa15.98■□□□□ 0.15
TOP3A-204ENST00000472959 CCDC140Q96MF4 163 aa15.98■□□□□ 0.15
TOP3A-204ENST00000472959 SEC22CQ9BRL7 303 aa15.98■□□□□ 0.15
TOP3A-204ENST00000472959 K7EIM0 57 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 CORTO00230 105 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 OVOL1O14753 267 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 NXPH3O95157 252 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 IGLL1P15814 213 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 SAMD5Q5TGI4 173 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 CLEC19AQ6UXS0 136 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 SCARB1Q8WTV0 552 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 MARVELD1Q9BSK0 173 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 RBKSQ9H477 322 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 GPN1Q9HCN4 374 aaPredicted RBP15.97■□□□□ 0.15
TOP3A-204ENST00000472959 PALMDQ9NP74 551 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 S4R3C0 116 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 NOTCH3Q9UM47 2321 aa15.97■□□□□ 0.15
TOP3A-204ENST00000472959 NBEAL1Q6ZS30 2694 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 INMT-MINDY4F8WBC2 141 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 I3L2K1 104 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 BMPR1BO00238 502 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 PRAF2O60831 178 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 GGCTO75223 188 aaKnown RBP15.96■□□□□ 0.15
TOP3A-204ENST00000472959 MED6O75586 246 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 IGHV3-23P01764 117 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 CLEC3BP05452 202 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 KLF5Q13887 457 aaPredicted RBP15.96■□□□□ 0.15
TOP3A-204ENST00000472959 TATDN3Q17R31 274 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 RPEL1Q2QD12 228 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 NOXA1Q86UR1 476 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 C12orf45Q8N5I9 185 aaPredicted RBP15.96■□□□□ 0.15
TOP3A-204ENST00000472959 DTD1Q8TEA8 209 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 C21orf62Q9NYP8 219 aa15.96■□□□□ 0.15
TOP3A-204ENST00000472959 ARL3P36405 182 aa15.95■□□□□ 0.14
TOP3A-204ENST00000472959 ATP5IP56385 69 aaPredicted RBP15.95■□□□□ 0.14
TOP3A-204ENST00000472959 C2orf83Q53S99 150 aa15.95■□□□□ 0.14
TOP3A-204ENST00000472959 OXLD1Q5BKU9 147 aa15.95■□□□□ 0.14
TOP3A-204ENST00000472959 SLC24A4Q8NFF2 622 aa15.95■□□□□ 0.14
TOP3A-204ENST00000472959 GAR1Q9NY12 217 aaKnown RBP15.95■□□□□ 0.14
TOP3A-204ENST00000472959 U3KQ87 197 aa15.95■□□□□ 0.14
TOP3A-204ENST00000472959 PPP5D1E7EU14 171 aa15.94■□□□□ 0.14
TOP3A-204ENST00000472959 G3V4G9 280 aa15.94■□□□□ 0.14
TOP3A-204ENST00000472959 LY86O95711 162 aa15.94■□□□□ 0.14
TOP3A-204ENST00000472959 MT-CO2P00403 227 aa15.94■□□□□ 0.14
TOP3A-204ENST00000472959 TXN2Q99757 166 aa15.94■□□□□ 0.14
TOP3A-204ENST00000472959 IGHV3-21A0A0B4J1V1 117 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 MPTX1A8MV57 137 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 SNRPGP15A8MWD9 76 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 SEC14L6B5MCN3 397 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 PTTG1O95997 202 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 FCGR2BP31994 310 aaPredicted RBP15.93■□□□□ 0.14
TOP3A-204ENST00000472959 GPR183P32249 361 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 MFAP4P55083 255 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 C9orf66Q5T8R8 295 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 SPSB3Q6PJ21 355 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 C1QL4Q86Z23 238 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 UXS1Q8NBZ7 420 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 PINX1Q96BK5 328 aaKnown RBP15.93■□□□□ 0.14
TOP3A-204ENST00000472959 BSCL2Q96G97 398 aaPredicted RBP15.93■□□□□ 0.14
TOP3A-204ENST00000472959 CIB3Q96Q77 187 aaPredicted RBP15.93■□□□□ 0.14
TOP3A-204ENST00000472959 CMYA5Q8N3K9 4069 aa15.93■□□□□ 0.14
TOP3A-204ENST00000472959 SYNGR2O43760 224 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 OR2C1O95371 312 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 IFNA10P01566 189 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 NPY1RP25929 384 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 INSL3P51460 131 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 SYNJ2BPP57105 145 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 ID3Q02535 119 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 IAH1Q2TAA2 248 aaPredicted RBP15.92■□□□□ 0.14
TOP3A-204ENST00000472959 KPRPQ5T749 579 aaPredicted RBP15.92■□□□□ 0.14
TOP3A-204ENST00000472959 GPHB5Q86YW7 130 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 OR4D5Q8NGN0 318 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 RNASEH2CQ8TDP1 164 aaKnown RBP15.92■□□□□ 0.14
TOP3A-204ENST00000472959 ELOVL1Q9BW60 279 aa15.92■□□□□ 0.14
TOP3A-204ENST00000472959 TGOLN2O43493 480 aa15.91■□□□□ 0.14
TOP3A-204ENST00000472959 WIPF1O43516 503 aa15.91■□□□□ 0.14
TOP3A-204ENST00000472959 NKX2-1P43699 371 aaPredicted RBP15.91■□□□□ 0.14
TOP3A-204ENST00000472959 Q56UQ5 140 aa15.91■□□□□ 0.14
TOP3A-204ENST00000472959 ACSM6Q6P461 480 aa15.91■□□□□ 0.14
TOP3A-204ENST00000472959 OR10C1Q96KK4 312 aa15.91■□□□□ 0.14
TOP3A-204ENST00000472959 RPS10-NUDT3A0A1W2PQS6 291 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 OR2T8A6NH00 312 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 F8W735 103 aaPredicted RBP15.9■□□□□ 0.14
TOP3A-204ENST00000472959 OPRK1P41145 380 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 RPP30P78346 268 aaKnown RBP15.9■□□□□ 0.14
TOP3A-204ENST00000472959 BEAN1Q3B7T3 259 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 FAM106AQ4KMX7 169 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 ZBTB8BQ8NAP8 495 aaPredicted RBP15.9■□□□□ 0.14
TOP3A-204ENST00000472959 UBAC2Q8NBM4 344 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 OR9G4Q8NGQ1 327 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 MAGT1Q9H0U3 335 aa15.9■□□□□ 0.14
TOP3A-204ENST00000472959 LGALS9O00182 355 aa15.89■□□□□ 0.13
TOP3A-204ENST00000472959 NPBWR1P48145 328 aa15.89■□□□□ 0.13
TOP3A-204ENST00000472959 DCTN2Q13561 401 aaKnown RBP15.89■□□□□ 0.13
TOP3A-204ENST00000472959 C11orf87Q6NUJ2 197 aa15.89■□□□□ 0.13
TOP3A-204ENST00000472959 TMEM170AQ8WVE7 144 aa15.89■□□□□ 0.13
TOP3A-204ENST00000472959 OR4C12Q96R67 309 aa15.89■□□□□ 0.13
TOP3A-204ENST00000472959 GSKIPQ9P0R6 139 aa15.89■□□□□ 0.13
TOP3A-204ENST00000472959 PEMTQ9UBM1 199 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms