RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PI3P19957 117 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 TBPP20226 339 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 APOC4P55056 127 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 PIGPP57054 158 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 RNASE10Q5GAN6 216 aaKnown RBP11.34□□□□□ -0.59
VTI1A-203ENST00000472892 OR52I2Q8NH67 350 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 ABHD1Q96SE0 405 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 RNF2Q99496 336 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 NXF2Q9GZY0 626 aaKnown RBP11.34□□□□□ -0.59
VTI1A-203ENST00000472892 ZFAND3Q9H8U3 227 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 EXTL2Q9UBQ6 330 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 A0A0B4J293 547 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 SPRY2O43597 315 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 JTBO76095 146 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 IGKV1-5P01602 117 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 SMIM18P0DKX4 95 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 PGAM2P15259 253 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 IZUMO4Q1ZYL8 232 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 RNASE12Q5GAN4 147 aaKnown RBP11.33□□□□□ -0.6
VTI1A-203ENST00000472892 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 TMEM116Q8NCL8 245 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 KIR2DL5BQ8NHK3 375 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 C15orf40Q8WUR7 153 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 TP53RKQ96S44 253 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 RHPN1-AS1Q9BWJ2 59 aa11.33□□□□□ -0.6
VTI1A-203ENST00000472892 TRAV14DV4A0A0A6YYC5 116 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 C3orf85A0A1B0GTC6 90 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 YIF1AO95070 293 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 CD74P04233 296 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 TMEM229BQ8NBD8 167 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 TERB2Q8NHR7 220 aa11.32□□□□□ -0.6
VTI1A-203ENST00000472892 GNG7O60262 68 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 ATG12O94817 140 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 BMI1P35226 326 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
VTI1A-203ENST00000472892 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 SPINK9Q5DT21 86 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 LCE2AQ5TA79 106 aaPredicted RBP11.31□□□□□ -0.6
VTI1A-203ENST00000472892 GPR107Q5VW38 600 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 FAM90A2PQ658T7 463 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 STPG3Q8N7X2 389 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 OR4D10Q8NGI6 311 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 ZFAND1Q8TCF1 268 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
VTI1A-203ENST00000472892 RNF183Q96D59 192 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 GALNT14Q96FL9 552 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 MAP6D1Q9H9H5 199 aa11.31□□□□□ -0.6
VTI1A-203ENST00000472892 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 ST8SIA3O43173 380 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 SNCAP37840 140 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 NPBWR1P48145 328 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 TAS2R19P59542 299 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 DEFB135Q30KP9 77 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 SP6Q3SY56 376 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 TOMM20LQ6UXN7 152 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 DUSP18Q8NEJ0 188 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 MIXL1Q9H2W2 232 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 COPZ2Q9P299 210 aa11.3□□□□□ -0.6
VTI1A-203ENST00000472892 A0A0J9YWU9 116 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 B3GALNT1O75752 331 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 RAB3DO95716 219 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 IFNA17P01571 189 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 CD5P06127 495 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 RPL35AP18077 110 aaKnown RBP11.29□□□□□ -0.6
VTI1A-203ENST00000472892 UCP1P25874 307 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 ETV6P41212 452 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 AKR1C2P52895 323 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 PPP5CP53041 499 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 SSBP1Q04837 148 aaKnown RBP11.29□□□□□ -0.6
VTI1A-203ENST00000472892 LYG2Q86SG7 212 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 SLC35G3Q8N808 338 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 CCDC71LQ8N9Z2 235 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 OR13C8Q8NGS7 320 aa11.29□□□□□ -0.6
VTI1A-203ENST00000472892 BIRC6Q9NR09 4857 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 GABARAPH6UMI1 98 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 TMEM50AO95807 157 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
VTI1A-203ENST00000472892 ATF4P18848 351 aaPredicted RBP11.28□□□□□ -0.6
VTI1A-203ENST00000472892 ALDH3B2P48448 385 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 SUB1P53999 127 aaKnown RBP eCLIP11.28□□□□□ -0.6
VTI1A-203ENST00000472892 EWSR1Q01844 656 aaKnown RBP eCLIP11.28□□□□□ -0.6
VTI1A-203ENST00000472892 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 SCGB2B2Q4G0G5 96 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 STEAP1BQ6NZ63 245 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 MARCH1Q8TCQ1 289 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 GINS3Q9BRX5 216 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 C6orf62Q9GZU0 229 aaPredicted RBP11.28□□□□□ -0.6
VTI1A-203ENST00000472892 VSIRQ9H7M9 311 aa11.28□□□□□ -0.6
VTI1A-203ENST00000472892 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 CORTO00230 105 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 CTDSP2O14595 271 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 CDS2O95674 445 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms