RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 BRS3P32247 399 aa0.94□□□□□ -2.26
CLK1-209ENST00000472679 HBA1P69905 142 aa0.94□□□□□ -2.26
CLK1-209ENST00000472679 HIST2H3PS2Q5TEC6 136 aa0.94□□□□□ -2.26
CLK1-209ENST00000472679 LINC00471Q8N535 108 aa0.94□□□□□ -2.26
CLK1-209ENST00000472679 LSM5Q9Y4Y9 91 aaKnown RBP0.94□□□□□ -2.26
CLK1-209ENST00000472679 TRBV6-7A0A0A0MS04 114 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 C2orf70A6NJV1 201 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 DCTN3O75935 186 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 CALB1P05937 261 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 ZNF93P35789 620 aaPredicted RBP0.93□□□□□ -2.26
CLK1-209ENST00000472679 COTL1Q14019 142 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 DEFB128Q7Z7B8 93 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 LRRC25Q8N386 305 aaPredicted RBP0.93□□□□□ -2.26
CLK1-209ENST00000472679 LINC00311Q8N616 119 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 OR4D11Q8NGI4 311 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 OR13C4Q8NGS5 318 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 TERB2Q8NHR7 220 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 DDI1Q8WTU0 396 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 MRPL57Q9BQC6 102 aaKnown RBP0.93□□□□□ -2.26
CLK1-209ENST00000472679 FBXL12Q9NXK8 326 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 TOPBP1Q92547 1522 aa0.93□□□□□ -2.26
CLK1-209ENST00000472679 LOC110117498A0A087WWA1 95 aa0.92□□□□□ -2.26
CLK1-209ENST00000472679 C8orf74Q6P047 294 aa0.92□□□□□ -2.26
CLK1-209ENST00000472679 IMP4Q96G21 291 aaKnown RBP0.92□□□□□ -2.26
CLK1-209ENST00000472679 GINS4Q9BRT9 223 aa0.92□□□□□ -2.26
CLK1-209ENST00000472679 C11orf68Q9H3H3 251 aaKnown RBP0.92□□□□□ -2.26
CLK1-209ENST00000472679 PKIGQ9Y2B9 76 aa0.92□□□□□ -2.26
CLK1-209ENST00000472679 MAP3K5Q99683 1374 aa0.92□□□□□ -2.26
CLK1-209ENST00000472679 KIF13BQ9NQT8 1826 aa0.92□□□□□ -2.26
CLK1-209ENST00000472679 LAMB4A4D0S4 1761 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 TRAV1-1A0A0B4J248 108 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 KCNK1O00180 336 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 HLA-DRB1P01911 266 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 MIR17HGQ75NE6 70 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 OR5A1Q8NGJ0 315 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 PPP1R2P1Q96PQ5 205 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 ZFP30Q9Y2G7 519 aa0.91□□□□□ -2.26
CLK1-209ENST00000472679 FAAHO00519 579 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 OR1I1O60431 355 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 TNNC2P02585 160 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 SPCS3P61009 180 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 SNRPD2P62316 118 aaKnown RBP0.9□□□□□ -2.27
CLK1-209ENST00000472679 OR2F1Q13607 317 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 PDE6HQ13956 83 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 KCNJ8Q15842 424 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 DNAJC9Q8WXX5 260 aa0.9□□□□□ -2.27
CLK1-209ENST00000472679 EML6Q6ZMW3 1958 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 BUB1B-PAK6H3BSN5 160 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 OR2T1O43869 369 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 HIST1H1EP10412 219 aaKnown RBP0.89□□□□□ -2.27
CLK1-209ENST00000472679 RPS20P60866 119 aaKnown RBP0.89□□□□□ -2.27
CLK1-209ENST00000472679 KHDC3LQ587J8 217 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 DPPA3Q6W0C5 159 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 OR4E2Q8NGC2 313 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 H1FXQ92522 213 aaKnown RBP0.89□□□□□ -2.27
CLK1-209ENST00000472679 NIPSNAP1Q9BPW8 284 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 MRPS26Q9BYN8 205 aaKnown RBP0.89□□□□□ -2.27
CLK1-209ENST00000472679 KLK9Q9UKQ9 250 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 HECW1Q76N89 1606 aa0.89□□□□□ -2.27
CLK1-209ENST00000472679 WRNQ14191 1432 aaPredicted RBP eCLIP0.89□□□□□ -2.27
CLK1-209ENST00000472679 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.88□□□□□ -2.27
CLK1-209ENST00000472679 DPRXA6NFQ7 191 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 IFNA5P01569 189 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 HIST1H1TP22492 207 aaPredicted RBP0.88□□□□□ -2.27
CLK1-209ENST00000472679 SSR2P43308 183 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 RPL5P46777 297 aaKnown RBP0.88□□□□□ -2.27
CLK1-209ENST00000472679 DEFA1P59665 94 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 HIST3H3Q16695 136 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 OOSP2Q86WS3 158 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 PHF13Q86YI8 300 aaPredicted RBP0.88□□□□□ -2.27
CLK1-209ENST00000472679 C20orf196Q8IYI0 205 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 PRTFDC1Q9NRG1 225 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 GUCA1BQ9UMX6 200 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 RIC1Q4ADV7 1423 aa0.88□□□□□ -2.27
CLK1-209ENST00000472679 HECW2Q9P2P5 1572 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 MTUS2Q5JR59 1369 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 DOCK5Q9H7D0 1870 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 A0A0D9SG52 128 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 PSMD12O00232 456 aaPredicted RBP0.87□□□□□ -2.27
CLK1-209ENST00000472679 MIFP14174 115 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 RHEBQ15382 184 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 RNASE10Q5GAN6 216 aaKnown RBP0.87□□□□□ -2.27
CLK1-209ENST00000472679 SPANXN5Q5MJ07 72 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 TOMM6Q96B49 74 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 TMEM147Q9BVK8 224 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 ULBP3Q9BZM4 244 aa0.87□□□□□ -2.27
CLK1-209ENST00000472679 SNAPC4Q5SXM2 1469 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 EXOC1LA0A1B0GW35 172 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 HYPMO75409 117 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 COX6A1P12074 109 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 NKX2-5P52952 324 aaPredicted RBP0.86□□□□□ -2.27
CLK1-209ENST00000472679 ANKRD29Q8N6D5 301 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 SIGLECL1Q8N7X8 197 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 ZNF418Q8TF45 676 aaPredicted RBP0.86□□□□□ -2.27
CLK1-209ENST00000472679 OR52E6Q96RD3 313 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 COMMD5Q9GZQ3 224 aa0.86□□□□□ -2.27
CLK1-209ENST00000472679 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.85□□□□□ -2.27
CLK1-209ENST00000472679 CD79AP11912 226 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 CDC42P60953 191 aa0.85□□□□□ -2.27
CLK1-209ENST00000472679 RAB4BP61018 213 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms