RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 LYSTQ99698 3801 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 UBFD1O14562 309 aaKnown RBP1.75□□□□□ -2.13
SGCE-210ENST00000472326 CXCL8P10145 99 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 CD40LGP29965 261 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 SKP1P63208 163 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 BSPH1Q075Z2 132 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 C9orf64Q5T6V5 341 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 ZNF563Q8TA94 476 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 RNASEH2CQ8TDP1 164 aaKnown RBP1.75□□□□□ -2.13
SGCE-210ENST00000472326 CCL19Q99731 98 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 PRSS27Q9BQR3 290 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 FAAP24Q9BTP7 215 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 CSMD3Q7Z407 3707 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 TENM2Q9NT68 2774 aa1.75□□□□□ -2.13
SGCE-210ENST00000472326 FLG2Q5D862 2391 aaPredicted RBP1.74□□□□□ -2.13
SGCE-210ENST00000472326 CR1P17927 2039 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 HECTD4Q9Y4D8 3996 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 NYNRINQ9P2P1 1898 aaKnown RBP1.74□□□□□ -2.13
SGCE-210ENST00000472326 FABP12A6NFH5 140 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 C8orf87E5RJ46 101 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 KPNA3O00505 521 aaPredicted RBP1.74□□□□□ -2.13
SGCE-210ENST00000472326 DENRO43583 198 aaKnown RBP1.74□□□□□ -2.13
SGCE-210ENST00000472326 NIPSNAP2O75323 286 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 TNFP01375 233 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 STATHP02808 62 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 NQO1P15559 274 aaKnown RBP1.74□□□□□ -2.13
SGCE-210ENST00000472326 CD79BP40259 229 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 MAGEA2P43356 314 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 UBE2G2P60604 165 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 ZNHIT3Q15649 155 aaPredicted RBP1.74□□□□□ -2.13
SGCE-210ENST00000472326 C6orf52Q5T4I8 152 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 DRAM2Q6UX65 266 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 FAM151BQ6UXP7 276 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 ATP6V1C2Q8NEY4 427 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 OR9I1Q8NGQ6 314 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 STOML3Q8TAV4 291 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 FAM210AQ96ND0 272 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 C7orf50Q9BRJ6 194 aaKnown RBP1.74□□□□□ -2.13
SGCE-210ENST00000472326 REG4Q9BYZ8 158 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 MED29Q9NX70 200 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 TAS2R13Q9NYV9 303 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 USE1Q9NZ43 259 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 HERC1Q15751 4861 aa1.74□□□□□ -2.13
SGCE-210ENST00000472326 CADP27708 2225 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 PIRO00625 290 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 GPR171O14626 319 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 HCRTO43612 131 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 MPZL2O60487 215 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 HPGDSO60760 199 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 UQCRHP07919 91 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 OCM2P0CE71 109 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 PET100P0DJ07 73 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 C8orf88P0DMB2 117 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 GTF2BQ00403 316 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 PTRHD1Q6GMV3 140 aaKnown RBP1.73□□□□□ -2.13
SGCE-210ENST00000472326 DOLPP1Q86YN1 238 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 PLCZ1Q86YW0 608 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 TMEM86AQ8N2M4 240 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 Q8N402 240 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 OR4P4Q8NGL7 312 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 SMIM12Q96EX1 92 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 TMA16Q96EY4 203 aaKnown RBP1.73□□□□□ -2.13
SGCE-210ENST00000472326 PGLYRP3Q96LB9 341 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 GPR22Q99680 433 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 DCUN1D5Q9BTE7 237 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 TP53TG1Q9Y2A0 90 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 FRAS1Q86XX4 4008 aa1.73□□□□□ -2.13
SGCE-210ENST00000472326 FREM1Q5H8C1 2179 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 TRAV17A0A0B4J275 112 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 LCE6AA0A183 80 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 EFCAB9A8MZ26 197 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 SMLR1H3BR10 107 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 CCRL2O00421 344 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 EPPINO95925 133 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 SRP14P37108 136 aaKnown RBP1.72□□□□□ -2.13
SGCE-210ENST00000472326 LPAR6P43657 344 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 TPRXLQ17RH7 258 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 TBC1D28Q2M2D7 210 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 RGS21Q2M5E4 152 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 LGALS9CQ6DKI2 356 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 EBLN2Q6P2I7 272 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 DNM1P34Q6PK57 102 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 CCDC121Q6ZUS5 278 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 FAM19A5Q7Z5A7 132 aaPredicted RBP1.72□□□□□ -2.13
SGCE-210ENST00000472326 BOD1L2Q8IYS8 172 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 OR4X1Q8NH49 305 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 WFDC5Q8TCV5 224 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 SMIM19Q96E16 107 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 TMEM56Q96MV1 263 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 SLC22A4Q9H015 551 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 OR51E2Q9H255 320 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 C16orf95Q9H693 158 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 PLEKHJ1Q9NW61 149 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 CHD5Q8TDI0 1954 aa1.72□□□□□ -2.13
SGCE-210ENST00000472326 A0A0D9SFI3 127 aa1.71□□□□□ -2.14
SGCE-210ENST00000472326 SLC16A4O15374 487 aa1.71□□□□□ -2.14
SGCE-210ENST00000472326 CD36P16671 472 aa1.71□□□□□ -2.14
SGCE-210ENST00000472326 ALOX5APP20292 161 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms