RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 NUPL2O15504 423 aaKnown RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 ST8SIA3O43173 380 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 CTSDP07339 412 aaPredicted RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 UCP1P25874 307 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 MFAP4P55083 255 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 MRPS10P82664 201 aaKnown RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 ERHP84090 104 aaKnown RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 SSBP1Q04837 148 aaKnown RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 RELQ04864 619 aaPredicted RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 TRIM16LQ309B1 348 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 LAMTOR1Q6IAA8 161 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 CLVS1Q8IUQ0 354 aaPredicted RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 SLC35G3Q8N808 338 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 CCDC71LQ8N9Z2 235 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 DYNC2LI1Q8TCX1 351 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 SMIM4Q8WVI0 70 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 PINX1Q96BK5 328 aaKnown RBP6.72□□□□□ -1.33
USF1-204ENST00000472217 TXN2Q99757 166 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 UBQLN2Q9UHD9 624 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 SMPXQ9UHP9 88 aa6.72□□□□□ -1.33
USF1-204ENST00000472217 IGHV3-49A0A0A0MS15 119 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 IGHV7-4-1A0A0J9YVY3 117 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 LCE6AA0A183 80 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 OR4C46A6NHA9 309 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 INS-IGF2F8WCM5 200 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 GNG7O60262 68 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 ATG12O94817 140 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 YIF1AO95070 293 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 IFNA17P01571 189 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 MEF2DQ14814 521 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 ODF3L2Q3SX64 289 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 RAB2BQ8WUD1 216 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 DIRAS2Q96HU8 199 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 OR10C1Q96KK4 312 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 RNF2Q99496 336 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 NXF2Q9GZY0 626 aaKnown RBP6.71□□□□□ -1.34
USF1-204ENST00000472217 TMEM222Q9H0R3 208 aa6.71□□□□□ -1.34
USF1-204ENST00000472217 CCDC59Q9P031 241 aaKnown RBP6.71□□□□□ -1.34
USF1-204ENST00000472217 C14orf166Q9Y224 244 aaKnown RBP6.71□□□□□ -1.34
USF1-204ENST00000472217 DISC1C4P0D8 188 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 CHEK1O14757 476 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 B3GALNT1O75752 331 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 OR5AC1P0C628 307 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 AKAIN1P0CW23 69 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 RNASE2P10153 161 aaKnown RBP6.7□□□□□ -1.34
USF1-204ENST00000472217 SNCAP37840 140 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 ETV6P41212 452 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 HOXA1P49639 335 aaPredicted RBP6.7□□□□□ -1.34
USF1-204ENST00000472217 TMBIM6P55061 237 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 IL18Q14116 193 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 SURF2Q15527 256 aaPredicted RBP6.7□□□□□ -1.34
USF1-204ENST00000472217 PVRIGQ6DKI7 326 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 Q6ZRM9 215 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 TMEM116Q8NCL8 245 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 OR4C16Q8NGL9 310 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 RNASE11Q8TAA1 199 aaKnown RBP6.7□□□□□ -1.34
USF1-204ENST00000472217 LHFPL5Q8TAF8 219 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 GLYATL2Q8WU03 294 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 RRNAD1Q96FB5 475 aaKnown RBP6.7□□□□□ -1.34
USF1-204ENST00000472217 BCL7BQ9BQE9 202 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 OVOL2Q9BRP0 275 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 RTBDNQ9BSG5 229 aaPredicted RBP6.7□□□□□ -1.34
USF1-204ENST00000472217 PDCD10Q9BUL8 212 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
USF1-204ENST00000472217 IGHV3OR16-13A0A075B7E8 117 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 TRAV14DV4A0A0A6YYC5 116 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 IGHV3-74A0A0B4J1X5 117 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 TEX13DA0A0J9YY54 714 aaPredicted RBP6.69□□□□□ -1.34
USF1-204ENST00000472217 CTDSPLO15194 276 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 CDS2O95674 445 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 NPBWR1P48145 328 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 APOC4P55056 127 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 AARDQ4LEZ3 155 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 TOMM20LQ6UXN7 152 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 DUSP18Q8NEJ0 188 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 OR51S1Q8NGJ8 323 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 IL17DQ8TAD2 202 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 RBPMSQ93062 196 aaKnown RBP6.69□□□□□ -1.34
USF1-204ENST00000472217 SLIRPQ9GZT3 109 aaKnown RBP6.69□□□□□ -1.34
USF1-204ENST00000472217 C6orf62Q9GZU0 229 aaPredicted RBP6.69□□□□□ -1.34
USF1-204ENST00000472217 NAA60Q9H7X0 242 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 GPR132Q9UNW8 380 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 TENM2Q9NT68 2774 aa6.69□□□□□ -1.34
USF1-204ENST00000472217 IGKV3-7A0A075B6H7 116 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 A0A1B0GU03 582 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 ANKRD20A5PA0PJZ0 165 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 CRYM-AS1A6NIL9 109 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 H3BMQ9 156 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 CORTO00230 105 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 GSTZ1O43708 216 aaPredicted RBP6.68□□□□□ -1.34
USF1-204ENST00000472217 TMEM50AO95807 157 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 OPRK1P41145 380 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 RPL5P46777 297 aaKnown RBP6.68□□□□□ -1.34
USF1-204ENST00000472217 TFPI2P48307 235 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 SUB1P53999 127 aaKnown RBP eCLIP6.68□□□□□ -1.34
USF1-204ENST00000472217 DHODHQ02127 395 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 BSXQ3C1V8 233 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 TMEM268Q5VZI3 342 aa6.68□□□□□ -1.34
USF1-204ENST00000472217 FAM90A2PQ658T7 463 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms