RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 LYNX1P0DP58 116 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 TMEM222Q9H0R3 208 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 NPIPB8E9PQR5 432 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 NPIPB9F8W1W9 429 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 H0YL77 283 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 NPIPB7O75200 414 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 CELA3AP09093 270 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 SAP25Q8TEE9 199 aa11.23□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 VENTXO95231 258 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 PTGDSP41222 190 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 LOXL4Q96JB6 756 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 DPM3Q9P2X0 92 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 PKD1L3Q7Z443 1732 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 IL6RP08887 468 aaPredicted RBP11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 ESDP10768 282 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 APCDD1LQ8NCL9 501 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 USP54Q70EL1 1684 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 TMEM50AO95807 157 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 CBLN1P23435 193 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 TCF23Q7RTU1 214 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 OR10S1Q8NGN2 331 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 IGHV3-73A0A0B4J1V6 119 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 TEX48A0A1B0GUV7 120 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 C5orf67F2Z3F1 127 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 KLF4O43474 513 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 C14orf144Q96I85 54 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 DSCAMO60469 2012 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 DTX1Q86Y01 620 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 ZNF114Q8NC26 417 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 AMELYQ99218 206 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 SIRT4Q9Y6E7 314 aaPredicted RBP11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 EFEMP2O95967 443 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 COX6A1P12074 109 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 PPIFP30405 207 aaKnown RBP11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 C1QL2Q7Z5L3 287 aa11.22□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 PAPPAQ13219 1627 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 SAP30O75446 220 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 PRB2P02812 416 aaPredicted RBP11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 BAALCQ8WXS3 180 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 BCORQ6W2J9 1755 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 MIXL1Q9H2W2 232 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPC1 479 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 ITGB1BP1O14713 200 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 RLFQ13129 1914 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 RREB1Q92766 1687 aa11.21□□□□□ -0.61
NPHP3-ACAD11-201ENST00000471702 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 RFPL3SP0C7P2 107 aa11.21□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 LHFPL6Q9Y693 200 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 V9GYH0 126 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NRXN3Q9Y4C0 1643 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ZNF585BQ52M93 769 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PLAC1Q9HBJ0 212 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CD160O95971 181 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FAM216BQ8N7L0 139 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TRAV2A0A0B4J234 112 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CXorf65A6NEN9 183 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TMEM91Q6ZNR0 172 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CYP2G1PQ6ZSU1 146 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 C21orf62Q9NYP8 219 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 DKK4Q9UBT3 224 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CGAP01215 116 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PLNP26678 52 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TEX45Q8NA69 505 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TRAV40A0A0B4J280 105 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 IGKV1-8A0A0C4DH67 115 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 EPOPA6NHQ4 379 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FHITP49789 147 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 HELZP42694 1942 aaKnown RBP11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 EVI2AP22794 236 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 GATA2P23769 480 aaPredicted RBP11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FXYD7P58549 80 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 C9orf62Q8N4C0 152 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 AHDC1Q5TGY3 1603 aaPredicted RBP11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 Q71RC1 249 aaPredicted RBP11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ZNF146Q15072 292 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 G6PC2Q9NQR9 355 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 MT-ND6P03923 174 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TMEM219Q86XT9 240 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ZNF729A6NN14 1252 aaPredicted RBP11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 DUTP33316 252 aaKnown RBP11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TMEM155Q4W5P6 130 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 Q6ZT83 130 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 SLC17A3O00476 420 aa11.19□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 SEC61GP60059 68 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms