RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NARS2Q96I59 477 aaKnown RBP10.43□□□□□ -0.74
HMGN1-211ENST00000471260 SPIN2AQ99865 258 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 SPIN2BQ9BPZ2 258 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 RSRP1Q9BUV0 290 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 ARV1Q9H2C2 271 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 TMED3Q9Y3Q3 217 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 A0A0G2JLM5 398 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 MSGN1A6NI15 193 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 CDS2O95674 445 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 DUTP33316 252 aaKnown RBP10.42□□□□□ -0.74
HMGN1-211ENST00000471260 P2RY1P47900 373 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 CAV2P51636 162 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 PIGPP57054 158 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 TMEM187Q14656 261 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 SMUG1Q53HV7 270 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 GGNBP1Q5YKI7 109 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 TEX45Q8NA69 505 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 OSR1Q8TAX0 266 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-211ENST00000471260 TMED6Q8WW62 240 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 DDB2Q92466 427 aa10.42□□□□□ -0.74
HMGN1-211ENST00000471260 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-211ENST00000471260 SORL1Q92673 2214 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 IGHV4OR15-8A0A075B7B6 117 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 IGKV1D-8A0A087WSZ0 117 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 A0A087WW49 117 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 ZNF705EA8MWA4 302 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-211ENST00000471260 TRGV3P03979 118 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 HOXB5P09067 269 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 SEC11BP0C7V7 166 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 PI3P19957 117 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 DEFA5Q01523 94 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 VMA21Q3ZAQ7 101 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 ZNF645Q8N7E2 425 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 MS4A10Q96PG2 267 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 PRR25Q96S07 402 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 SLC2A9Q9NRM0 540 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 FAM212BQ9NTI7 297 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-211ENST00000471260 STRAPQ9Y3F4 350 aaKnown RBP10.41□□□□□ -0.74
HMGN1-211ENST00000471260 OR2W1Q9Y3N9 320 aa10.41□□□□□ -0.74
HMGN1-211ENST00000471260 SRRM4A7MD48 611 aaKnown RBP10.4□□□□□ -0.74
HMGN1-211ENST00000471260 SAP30O75446 220 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 SLURP1P55000 103 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 UBE2KP61086 200 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-211ENST00000471260 IL22RA2Q969J5 263 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 C5orf30Q96GV9 206 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 ZNF355PQ9NSJ1 428 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 UQCC1Q9NVA1 299 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 FBXL17Q9UF56 701 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 PRELID3BQ9Y3B1 194 aa10.4□□□□□ -0.74
HMGN1-211ENST00000471260 LINC00473A8K010 186 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 F8W036 122 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 ST8SIA3O43173 380 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 IGHV3-11P01762 117 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 AADACP22760 399 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 FCGR2CP31995 323 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 OR5T1Q8NG75 326 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 USMG5Q96IX5 58 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 GINS3Q9BRX5 216 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 ELOVL1Q9BW60 279 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 SMDT1Q9H4I9 107 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 GSKIPQ9P0R6 139 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 SMAD5-AS1Q9Y6J3 95 aa10.39□□□□□ -0.75
HMGN1-211ENST00000471260 MED6O75586 246 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 LY86O95711 162 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 PPYP01298 95 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 OR5AC1P0C628 307 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 PVALBP20472 110 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-211ENST00000471260 PRSS8Q16651 343 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 RPL7L1Q6DKI1 246 aaKnown RBP10.38□□□□□ -0.75
HMGN1-211ENST00000471260 BTNL8Q6UX41 500 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 OR4C12Q96R67 309 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 HSD17B10Q99714 261 aaKnown RBP10.38□□□□□ -0.75
HMGN1-211ENST00000471260 DNAH9Q9NYC9 4486 aa10.38□□□□□ -0.75
HMGN1-211ENST00000471260 ACTL6BO94805 426 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 CD5P06127 495 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 ADCYAP1P18509 176 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 S100GP29377 79 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 ZNF266Q14584 549 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 MSMO1Q15800 293 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 MRGPRG-AS1Q2M3A8 158 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 ATRAIDQ6UW56 229 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 PUSL1Q8N0Z8 303 aaKnown RBP10.37□□□□□ -0.75
HMGN1-211ENST00000471260 OR4D5Q8NGN0 318 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 TMEM56Q96MV1 263 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 TREM1Q9NP99 234 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 PRELID1Q9Y255 219 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 LSM5Q9Y4Y9 91 aaKnown RBP10.37□□□□□ -0.75
HMGN1-211ENST00000471260 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 TNCP24821 2201 aa10.37□□□□□ -0.75
HMGN1-211ENST00000471260 A0A1B0GW64 132 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 FAM74A7A6NL05 159 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 GPR31O00270 319 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 FCGR3BO75015 233 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 PITX3O75364 302 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 TUSC2O75896 110 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms